XLOC_010744 (tmem245)


Basic Information

Item Value
gene id XLOC_010744
gene name tmem245
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 27126473 ~ 27149202 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00021022
AGATGATAGTGTGGCTGGAGCGCTCCCTGGATAAGCTGATCAGTATTTTCATTATCTTCCTGCTGGTAACTGGCACACTGCTCATGGGCTTGCTGCTCACAGCTATGGTACACCAAGAGAGCGTTCATATCATTGAGGTCACCAGTAACCTGATCAACGAGACCGTGTCCAACCACCCAGAGTGGGCCAACTGGCTTCCAGAGGCCCAAGTTGTCCAGAAGGCTTTAAACTCTGCTGCCACCAATGTTTACCAACACGGGAGAGAATGGATCACGCATAAGCTTCATAAGATATTGGGTGATAAAGTAAACAACACAGCTGTGATTGAGAAACAAGTTTTGGAGCTGTGGGACCGTCTTTATCAGTCTTGGATTGTGAAGAACGTGACTCACACTGGACGACTCCGTGGACACAAGCTACATATGCACAGGCAGAACAGCTGGCTGGGAGACATACTGGACTGGCAGGACATCGCCTCATTCCTGCAGGAGAATATTGAGACACTGCTTTCGATATTGGAGTCTCTGTGGGTGGTGATGAGTCGAAATGTTGGTTTACTGATATCCACAACAACAACGCTGCTTACCGTACTATTCCACAGCGGCACCGCACTGCTCAACTTTGCCCTGTCTttgGTGATTTTCCTGACCACACTTTTTTACCTGCTGAGCTCCAGTGGTGAATACTATAAACCTGTGAAATGGGTTATCAGCCTCACTCCCCTCTCCCAACCTGGACCCTCTTCAAACATAATCGGCCAGTCTGTGGAAGAGGCCATCAGGGGTGTGTTTGATGCTTCTCTGAAGATGGCTGGATTCTATGGCCTGTACACTTGgctcacacacacaatatttggCATCAACATTGTCTTCATACCTTCTGCAATGGCAGCAATCTTAGGTGCCGTGCCGTTTTTGGGCACATACTGGGCGGCTCTTCCAGCGGTGTTGGATTTGTGGTTGGCACAGGCTGAGGGAGTGAAGGCTCTACTGCTTCTCTTCTTCCATCTGCTGCCAACGTACTTTGTCGACACTGCCATATACTCTGACATATCAGGAGGTGGACATCCATATTTGACCGGCCTCGCAGTAGCAGGTGGAGCGTACTATTTGGGTCTGGAAGGTGCCATCATTGGACCCATCCTGCTCTGCATACTGGTGGTCGCATCCAACATCTACAGTGCCATGCTAATGAGCCCTAGCAGCAGCCAGCCAACGCCAGTGCAGAGCCACTTTCCTGGACATCACACCAGGTCATTTGCAGAAACCCCAATGCAGCTGAAGAGGAGCAATGAATGAGAGTCATTTAAGCAGCCTGTCATGCTTGTTAACAGCTCCCCCTTCTCTAGGTTGTCCCATACAGcactttaagactttaaaaagaGGGCAAATTTTCCATATCTTTACCCTAAGGGTTCACACGCTACATTCTTCGCAAATGTAGCTCTCATAGCACATAGCATAATGATGCCCCTCGATGTCGACTTCTGTGCTAACAGTTCATTTAGCACTTAGCACTGTGATGCTAAATTTGTGTAATGCTAGGACACCAGGCTCCAAAAAGGCTGTACTGCTTGCACACTCCAGTGCAAAGTTTAGTTAGCAGGCCTGTGCTTTGTCTAGCACTGCACTGGCGAATGATGCTATCAGTTAGCATACTCACAACACTATATGTTTACATTATGCTTTACTGTAACAGTTCACCAATGTCCCATTTAGGCGGtaaatcacagattttttttttatacaaactgATATCTTATCCCATATTGTGGATGTGTTTGGCACTGTTGTTTATGAACAGACTTTACTCCCTGATCCTACTATTTAAACAGTGTTATATCTTTCTGAACTCAAACATATACAGTTCATGTTCTACTGCCCATAGAATTACATGAATTTTCTCTATCAGGTTTGTTGTATTTGATTTTACATAGAATGAAACTCAACAGAATAATTTAGCAGCACTAAACCTATACAAATATCCTTTTTCAGGAGTATTTGTTCATGAACAAATTCTGTATACTGTAAAGTAGCTTAACTGAAACAATGTGAAACTCCTAGAGTGTTGCCATCTCACATAGTTGTATATTTATAttgctatttgttgtcccatcaGCTTTATACATTACCTCAGGCGTCGTAATGCATTTTTAAGTTTGTGTTGTTCTTGGGCTGAATCTGAGTGAGGTACATTGTGAGATTGATGTACTATGATGCATTTCTTCAATTGTTCCGCATTGATTTTATTTCACTTCCATCGCATAGCTTTATTAAAATCcctgtttttatattaatatatggtAATTCCTCTTTGTACAAACAGCACTATTTGCTTAATGTATTGTTTTGTGTTCTGACGTTTAAGCAGTGTGCAGAGATACAGCTTTGGTAGCATTAAAGACAAATGCTGCTGGCAGAAATGATAATGCTTGTTTACAGGAGAGTAGAGATGGCTCCAAGTCAAGCTTGAATAAATTGCACTGAACAGAAGAAATACTTACTCTGCTGTTTCccattatttgtttttccactttattttggctagaatatgcAAAAAGTGTGTTTTGGAAAAGTTGTCGATGAAGAGTGAAAGTGGATGTATTGTTTTTTCAGTTTTACCAAATAATTGATATATAATTTGGTTAATTGTTGTGATGGCACATTACAAGCATggctttattatatttttaatgtgaAAAGAGTGGAGATGGGGTCACtaataacatattttaataaaactgacTACATTTTAA
>TCONS_00021023
atgagaaaaacagaaaaaagagtTACTTTTCAAGTGTTGTATCATGAATTTCATGGCATTTTGCGAGACCAAAGATCTGTATTTTCTGAAGTTTTGTTCTGCAGTTTCCATACTACTGTCATTTCGCTAACAATTATTTCAACCCTTCTTCGCCTCACAGACTCTATAGACACCCCGAAGGGTCTCTTCAACATTCCCTCATCCCGACGACGTAGCAGACTAGAATTCAGGGGTTTCCAGCCGAAACAGAAGACCAGCGATATCTACTTTGTGCTGCTGGCCTGGGCGATAGTGCTGGTGCAGATCTGGCTCAACCTCTGGCTCTTACAGTTACTGCCCATCCCTGTTGCTGTTTGGGTCTTGAAAAAGGCGGTTGTCCGTTTTGGGATGAAGGACTTCATCGGGCGAACTCTAGCCCAGTGGTGGACGGTATCCGAGAAGTTCGTCAAAGACAGAGAGGATGCTCTTCTGCCTGGACCGATCAAAGGCCTGACACATTTCTTGCTTCGCGTGGACACTAAGATGATAGTGTGGCTGGAGCGCTCCCTGGATAAGCTGATCAGTATTTTCATTATCTTCCTGCTGGTAACTGGCACACTGCTCATGGGCTTGCTGCTCACAGCTATGGTACACCAAGAGAGCGTTCATATCATTGAGGTCACCAGTAACCTGATCAACGAGACCGTGTCCAACCACCCAGAGTGGGCCAAGTAA

Function

symbol description
tmem245 Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human TMEM245 (transmembrane protein 245).

GO:

id name namespace
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-100922-188 Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human TMEM245 (transmembrane protein 245).

Ensembl:

ensembl_id ENSDARG00000070455

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00021022 False 2755 mRNA 0.42 11 27126473 27138478
TCONS_00021023 True 714 mRNA 0.48 4 27138180 27149202

Neighbor

gene id symbol gene type direction distance location
XLOC_010743 ino80c coding downstream 270528 26850481 ~ 26855945 (-)
XLOC_010742 pdp1 coding downstream 305839 26816753 ~ 26820634 (-)
XLOC_010741 BX511010.1 coding downstream 374268 26747753 ~ 26752205 (-)
XLOC_010740 NA coding downstream 394545 26719880 ~ 26731928 (-)
XLOC_010739 esrp1 coding downstream 449788 26645663 ~ 26676685 (-)
XLOC_010745 LO017771.1 coding upstream 8481 27157683 ~ 27161410 (-)
XLOC_010746 frrs1l coding upstream 16955 27166157 ~ 27174373 (-)
XLOC_010747 alg2 coding upstream 66736 27215938 ~ 27224246 (-)
XLOC_010748 NA coding upstream 206216 27355418 ~ 27373866 (-)
XLOC_010749 erp44 coding upstream 267998 27417200 ~ 27442344 (-)
XLOC_010626 CR392024.2 misc downstream 6231298 20895112 ~ 20895175 (-)
XLOC_010738 BX537166.2 non-coding downstream 484439 26619613 ~ 26642034 (-)
XLOC_010737 CR391910.3 non-coding downstream 525040 26601000 ~ 26601433 (-)
XLOC_010734 CR391910.2 non-coding downstream 619069 26503093 ~ 26507404 (-)
XLOC_010752 NA non-coding upstream 446360 27595562 ~ 27598677 (-)
XLOC_010756 NA non-coding upstream 828764 27977966 ~ 28006936 (-)
XLOC_010767 NA non-coding upstream 1881480 29030682 ~ 29042101 (-)
XLOC_010769 CR938717.1 non-coding upstream 2006536 29155738 ~ 29155852 (-)

Expression


Co-expression Network