XLOC_010746 (frrs1l)


Basic Information

Item Value
gene id XLOC_010746
gene name frrs1l
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 27166157 ~ 27174373 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00021025
gaaggcggcgcagtaggtagtgctgtcgccttacagcaagaaggtcactggtctgagccttggctgggtcagttggcgtttctgtgtggagtttgcatgttctccctgcctttgcTCTCTGCCAGTCCTACCGACGATAATGTGCTGCGGGCCGGACACGGAGAGCACGGAGAACCGGGGCACGAGGAGCCACATAAGGACTCCTATAGCACATTCGCCTCCGAGTTCCTGGAGTCCAGATACCTGTCAGACGAAGGTTACCCTTTCCCAACTGCACCCCCTGTGGACCCATTTGCCCGCATCAAAGTCAGCGACTGTGGAGTAACCAAAGGATGCATCAGATATGGCAAACCAGGCTGTGACGCAGAGTCCTGTGACTATTTCCTGAGTTTCAGACGCATTGGCACAGATGTGGAATTCGAGATGAGTGCAGACACTGATGGATGGGTTGCCGTTGGTTTCTCTTCAGATAAAAAGATGGGAGGTGATGATGTCATGGGCTGTGTTCATGATGATAACGGACGTGTACGGATCCATCATTTCTATAATGTGGGCCAGTGGGCCAAAGAAATCAAGCGCAACCCAGCACGGGATGAAGAGGGCATCTTTGAAAACAACCGCGTCACCTGCCGCTTCAAACGGCCTCTTCATGTGGCACGCGAGGAAACACTGGTGGACCTGCACCTGAGCTGGTACTATCTGTTCGCTTGGGGACCTGCTATACAAGGCTCCATCACAAGGCATGACATTGACTCCCCGCCGGTGTCAGACCGCATGATCAGCATCTATAAATATGAGGACATTTTCATGCCTGCCACTGCCTATCAGACATTCTCTTCTCCCTTTTGCCTTCTCCTCATCGTTGCTCTTACCTTCTACCTGTTGATGGGCACGCCATAA

Function

symbol description
frrs1l Predicted to act upstream of or within regulation of glutamate receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000103940

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00021025 True 900 mRNA 0.53 6 27166157 27174373

Neighbor

gene id symbol gene type direction distance location
XLOC_010745 LO017771.1 coding downstream 4747 27157683 ~ 27161410 (-)
XLOC_010744 tmem245 coding downstream 16955 27126473 ~ 27149202 (-)
XLOC_010743 ino80c coding downstream 310212 26850481 ~ 26855945 (-)
XLOC_010742 pdp1 coding downstream 345523 26816753 ~ 26820634 (-)
XLOC_010741 BX511010.1 coding downstream 413952 26747753 ~ 26752205 (-)
XLOC_010747 alg2 coding upstream 41565 27215938 ~ 27224246 (-)
XLOC_010748 NA coding upstream 181045 27355418 ~ 27373866 (-)
XLOC_010749 erp44 coding upstream 242827 27417200 ~ 27442344 (-)
XLOC_010750 tex10 coding upstream 334008 27508381 ~ 27543092 (-)
XLOC_010751 zgc:153215 coding upstream 386741 27561114 ~ 27566552 (-)
XLOC_010626 CR392024.2 misc downstream 6270982 20895112 ~ 20895175 (-)
XLOC_010740 NA non-coding downstream 434229 26719880 ~ 26731928 (-)
XLOC_010738 BX537166.2 non-coding downstream 524123 26619613 ~ 26642034 (-)
XLOC_010737 CR391910.3 non-coding downstream 564724 26601000 ~ 26601433 (-)
XLOC_010734 CR391910.2 non-coding downstream 658753 26503093 ~ 26507404 (-)
XLOC_010752 NA non-coding upstream 421189 27595562 ~ 27598677 (-)
XLOC_010756 NA non-coding upstream 803593 27977966 ~ 28006936 (-)
XLOC_010767 NA non-coding upstream 1856309 29030682 ~ 29042101 (-)
XLOC_010769 CR938717.1 non-coding upstream 1981365 29155738 ~ 29155852 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000027_06678265_06682654 FRRS1L coding CI01000027 null 6678167 ~ 6684983 (-)