G292863


Basic Information

Item Value
gene id G292863
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000080
NCBI id null
chromosome length 5175454
location 4021895 ~ 4022370 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU332364
GCCCTGAAAGGGTGAAGGCCCTATTGTTTTCCTTAGGATTATTCTTATTTTTCTTCTTATTATTTTTCGTCAAGATTTTGGGAGCTTTCGGGATCCTTAACATGCTCAAAAACTCTTGAAAATTTGTACACAGGTCAGAGGCATATATTGACTGATTTGAATGAAACTTCAGCTGCATGTTTGTTGTAGGAGGCTGATCACATGGATGTATTTATTGTGTCAAAGTCATAGCACCACCAACTGGCAACAGGAATTGTGTCACTTTCAAAAATGCTTTGAAATCACCCTCTTATTTTGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU332364 True 299 lncRNA 0.37 2 4021895 4022370

Neighbor

gene id symbol gene type direction distance location
CI01000080_04006295_04009794 NA coding downstream 12101 4006181 ~ 4009794 (-)
CI01000080_03972165_03981008 NA coding downstream 39130 3972131 ~ 3982765 (-)
CI01000080_03925953_03961599 DGKH coding downstream 60078 3925530 ~ 3961817 (-)
CI01000080_03882251_03905283 AKAP11 coding downstream 116612 3882215 ~ 3905283 (-)
CI01000080_03871122_03871424 NA coding downstream 150010 3870817 ~ 3871885 (-)
CI01000080_04185680_04192219 RGCC coding upstream 162776 4185146 ~ 4192219 (-)
CI01000080_04196209_04198578 NA coding upstream 172692 4195062 ~ 4198578 (-)
CI01000080_04199562_04201445 KBTBD7 coding upstream 176897 4199267 ~ 4201597 (-)
CI01000080_04226079_04237658 SLAIN1A coding upstream 203658 4226028 ~ 4237658 (-)
CI01000080_04239679_04243440 NA coding upstream 217015 4239385 ~ 4243440 (-)
G292843 NA non-coding downstream 152382 3869307 ~ 3869513 (-)
G292833 NA non-coding downstream 183717 3837979 ~ 3838178 (-)
CI01000080_03823638_03839211 NA non-coding downstream 194725 3823433 ~ 3839456 (-)
G292726 NA non-coding downstream 258778 3762147 ~ 3763117 (-)
G292737 NA non-coding downstream 260004 3761519 ~ 3761891 (-)
G292868 NA non-coding upstream 3990 4026360 ~ 4028482 (-)
G292905 NA non-coding upstream 115260 4137630 ~ 4140895 (-)
G292907 NA non-coding upstream 118703 4141073 ~ 4141365 (-)
G292906 NA non-coding upstream 119244 4141614 ~ 4142126 (-)
G292947 NA non-coding upstream 142411 4164781 ~ 4165003 (-)
G292714 NA other downstream 293885 3715481 ~ 3728010 (-)
CI01000080_03207204_03212602 NA other downstream 803492 3207204 ~ 3212913 (-)
G292387 NA other downstream 1278649 2733587 ~ 2743246 (-)
G292349 NA other downstream 1496486 2518078 ~ 2525409 (-)
G292089 NA other downstream 2349975 1635762 ~ 1693395 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
rainbow trout (Oncorhynchus mykiss) G19054 NA non-coding NC_048565.1 CM023219.2 19870442 ~ 19870786 (+)
striped catfish (Pangasianodon hypophthalmus) G18733 NA non-coding NC_047595.1 CM018541.1 35260666 ~ 35428647 (+)