G292905


Basic Information

Item Value
gene id G292905
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000080
NCBI id null
chromosome length 5175454
location 4137630 ~ 4140895 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU332414
AAAAGACACCTACATATTGGATGGCCTGAGGGTAAGTAAATTAACAGCAGATCTTAATTTTTGGGCGAATTATCCCTTTAAGTAGGCAGCTCAGTAGGTTTTGGAACAGAGCATCAGTGTTTTCAGTAGGAACATTCTGTAGGACAATCTTGCTATATGTGAATAAAAGCCTAAATTAACTCTGTTCATCATATAAAGTGATCGAGGCTCCTCAAAAAATCTGGACTAAACCACTCAATTTATATGGATTCGTTTTTACGATGTCTTTATGAACTTTTTGAAGCATTAAAGTGTCAGTTGCGTAGGCGTCTAGAAATGTCTCAGATTTCATCACAAAGATCTTCATTTGTGTTCCGAAGATGAACAAAGGTCTTACGGGTTTGGAACAACATGAGGGTGAGTAATTATTGACAGAATTTTCATTTTTGGGTGAACTAACCCTTTAAGTAGGCAGCTCAGTAGGTTTTGGAACAGAGATTCAGTGTTTTCAGTAGAAACATTCTGTAGGACTGCTGGCTTTCCAAAGATCAACTCATCATGCTGGCCAGATTTTATAAATTACAGTCCCACTTTCTCCTCGGCAACATCTCAGGAGTGTGGCGTAACTGGAGCCAGGGGCTGGATTCCTCAGCTCCGTGTGAGAGGCAGGGTGGCAGCGCCGGGCGTCAGTGGGTCCAGGGGACAGGAAGGAAAAAGACTGTTGACATAGATGGAGCACTTGGAAAGCGTCTCAGAGAAGTTTGCGCAAGCAGTGAAGCGCGTGCAGTCAGGTGGACAACATTCCACACTCAGCACTGCTAACACGGGCCTGGTACAGAGCAGAGGTCAAATATGACAGGAAGTCCAGAAAAAAAACATGTCCCTCAAGATGACTCACAAACACAGGATGCACAGAAGGCTATACTTTTCTGCAGTAAATATATCCTCATCTTTGTGAGCTGAAAATGCAAACTTTATCTGTTCTTTTGACCTCTGGACCTGCTATTTCTGTGAGCTGTTGTTTTTCCTTTAAAGTTTCTCACAGCTCTGTGTCAGCGGAGCCGATTGTCAGGCCTGTCAGAGGTCCCGAATACATTTTCATTTGCACTCATTTGGTTAAAGAGTGATGAGTGTGTAATGGGATGGCTGAGGAATGTGGTGTGGAATTGCACTTGAGGTTCTGGTTTCTCAGGACAGAAAGAGATTTACGAGGAAGTTCTTGGGTGATGGGGTGGCGGTGGTGTGCGGCTGACTCTCTCTTTCTTTCGTTTCAGTCTCAGTCCCTACCATAAGTTACAGGATGTGTGCACTTTACAATGATGTGTTTAGAGGACACTTGGAAAATCCCAACAAACTTGAAGAAAGAGTGCCAATTCTTACACAATACAAGGCTCTTGGAAACAAAACAGGTTACACTCAGACACGCCTCATGTTCTATTAATACACTCTTGACCACAACAGCTGGGCAGTTTTAGTGATATAATTACACAACATTATGGTGTGTTACATAATGTTGTGAATAATATTTTGGATGTATTTTACATAACAATTTTTGAACCATATAATTTTACACTATTATATTTTGTCATTTGAAAATTGCATTATTTTAATGTGTTTAACTTGATTTTTTGAATATAATCAAAAGGCATTAATATACAATATATTACAGGGCTGTTGAATGCTCGAATCTGACTGGTTGATGAATGTTCTAAGGTGTGCAATTATTTTCAGGGAAACGCATGGCTAAAGCAGTTCTAGCAGGTCTTGATCGCATTACAGTTTCATATCACCTCACCAAATGATTTCAGTTATTTCCTTACAGCCTACAACAGCAAAAGAACCAAAACCCACAGCGACACTGACCAAGCAAATAAATATGGTAAACAATATGATAAAAATGGCAAAATATTTCCATGTTTCACTATTAGTAGAGACGCTGCTGCCAAACACACAGACTAACACACGCTTAATCTCTCTCTAATAACTGCATAATAGCTCTAAAATGCCTTTTGGAATTCGTAATGGAGGCAAGAGCGTTAGAACGCTACACACAAGAGCGTTTTAAAGACAAAAACCTGACAAATGTCTTAAATACAACATCTGAACAGTGTCTTGAGGTGTGGTAACCGTAGTATAAGCGGAATAATTGACTCCGGTCCATTAAATTATTAGAAAATAATGCACACCACTTCACACCGTGGCCACATTATCACCTCGGGTGTGCATTTTATTCAAATAGTTCAATGTCCCGTTGTCAATTATTAGTGCTAGCTATATTGCCCAGCACTGTTAAATGCACAATCAAACCAATGCACTCAACTCAGTCTTAACATAGCATGGATAGCAATTTAGGCATATGCGTGATTATGTTAAAAGCTCATAGAATATGTTAAAACAACAGACTGCCAAACTGAAAATACAATCTAATTTTCCATAACACTTTGTGCAAATATTGTAGACTCATACAGTTCAGTCCTGATGCAGCACACAATTGTGAATTATGACTGTGGATTTGCATGCAGTATAGTCCATACACAAAGACTGTGATGAAATCTCTCACTCATTTTTCAGAAAAAGAAGGCCCATTTTGGGTTAATAACAGACCAAAACCAGAGGATCCACATAGAAACCGTCCAGGTCACAAAAAATTATTTTGAAAACATAAAATTTTGCTTAAATTTTTTTAGTTTAGTTTTTTTTTAAACAAAACAACAACAACAAAAAAACTAAAAATGAAATAACTAAAATAAAAATTGTTTTAATTAAAAAAGGGTTTTTTAATTAACAGTATTTTTTTTATTCTTAAGCATATCCCCCCAAATTCTCACCAACACTTTATTTATACATTTACATTTACTTTTGAGTTTTTTTTTTTTTTTTTTTAATTCACAGGTGCTTCCCGTTTTGCTAAAATATTGCTAAAATATATTTTTTTTAAATCAGCATGCATGAATGTCAGTTATGCTTTATGTGTGTATGTACACAGATCAGGCATAACATTATGAGCACTGACAGGTGAAGTGAATAACACTGATTATCTCTTCATCACGGCACCTGTTAGTGGCTGGGATATATTAGGCAGCAAGTGAACATTTTGTCCTCAAAGTTGATGTGTTAGAAGCAGGAAAAATGGGCAAGCGTAAGGATTTGAGCGAGTTTGACAAGGGCCAAATTGTGATGGCTAGATGACTAGGGAGAGCGTTTTCACATTTGGCTCCTAAACTCTGGAATAGCCTTCCTGATAATGTTCGGGGCTCAGACTCGCTCACCCAGTTTAAATCTAGATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU332414 True 3266 lncRNA 0.38 1 4137630 4140895

Neighbor

gene id symbol gene type direction distance location
CI01000080_04006295_04009794 NA coding downstream 127836 4006181 ~ 4009794 (-)
CI01000080_03972165_03981008 NA coding downstream 154865 3972131 ~ 3982765 (-)
CI01000080_03925953_03961599 DGKH coding downstream 175813 3925530 ~ 3961817 (-)
CI01000080_03882251_03905283 AKAP11 coding downstream 232347 3882215 ~ 3905283 (-)
CI01000080_03871122_03871424 NA coding downstream 265745 3870817 ~ 3871885 (-)
CI01000080_04185680_04192219 RGCC coding upstream 44251 4185146 ~ 4192219 (-)
CI01000080_04196209_04198578 NA coding upstream 54167 4195062 ~ 4198578 (-)
CI01000080_04199562_04201445 KBTBD7 coding upstream 58372 4199267 ~ 4201597 (-)
CI01000080_04226079_04237658 SLAIN1A coding upstream 85133 4226028 ~ 4237658 (-)
CI01000080_04239679_04243440 NA coding upstream 98490 4239385 ~ 4243440 (-)
G292868 NA non-coding downstream 109148 4026360 ~ 4028482 (-)
G292863 NA non-coding downstream 115260 4021895 ~ 4022370 (-)
G292843 NA non-coding downstream 268117 3869307 ~ 3869513 (-)
G292833 NA non-coding downstream 299452 3837979 ~ 3838178 (-)
CI01000080_03823638_03839211 NA non-coding downstream 310460 3823433 ~ 3839456 (-)
G292907 NA non-coding upstream 178 4141073 ~ 4141365 (-)
G292906 NA non-coding upstream 719 4141614 ~ 4142126 (-)
G292947 NA non-coding upstream 23886 4164781 ~ 4165003 (-)
G292949 NA non-coding upstream 25973 4166868 ~ 4167428 (-)
G292951 NA non-coding upstream 29694 4170589 ~ 4170850 (-)
G292714 NA other downstream 409620 3715481 ~ 3728010 (-)
CI01000080_03207204_03212602 NA other downstream 919227 3207204 ~ 3212913 (-)
G292387 NA other downstream 1394384 2733587 ~ 2743246 (-)
G292349 NA other downstream 1612221 2518078 ~ 2525409 (-)
G292089 NA other downstream 2465710 1635762 ~ 1693395 (-)

Expression


Co-expression Network