CI01000082_00135087_00136976 (MYEOV2.S, MYEOV2, COPS9)



Basic Information


Item Value
gene id CI01000082_00135087_00136976
gene name MYEOV2.S, MYEOV2, COPS9
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000082
NCBI id null
chromosome length 5120761
location 134964 ~ 137769 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000082_00135087_00136976.mRNA
AGAGTGATTAACAGCTTCAGAGTGCATGATTGTGATCTATTATACGACCAGTTGTAAATATAGAAAAAGTAAGAAATAAACAAAAGTGTCATCCTGATGCACAGAAATTATTTTAATACCATCACTACAATAATCTGTGAGGACCAGTTCTCCAACCGAGCCAGTGGGACCCGTTTTCCAGCCGGTTACATTTTGACGTAACAACAACTGGTGATGTGAAGCCGCGAATCGATTCCTTCGAACAGTTCGTTGTAAAGAACCGGTTCGATGCTTTTTATCGCATTATGTGGTCCTTAGCGACTGGTGTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAACATTTATTTATCGCGGATTTTTTTAAATACTGGCGCTGAAGTTATGAAGCCAGCAGTTGATGAAATGTTTCCTGAGGGAGCTGGTCCGTATGTGGACCTGGATGAGGCAGGGGGCAGCACTGGACTGCTGATGGATCTGGCCGCCAATGAGAAGGCAGTGCACTCAGACTTTTTCAATGACTTTGAAGATCTATTTGATGACGATGATATTCAGTGATGAAGAGGACGAGTAGAACGGATTTCTCCACTGTATAAAATGTTCATTTTTGTACATTTAAGTGTTTTTTTCTCTACTTTAAGAGTGATATTGCATTAACTCTTCAGTTCATTAATAAA
>TU334567
NNNNNTTAACATTTATTTATCGCGGATTTTTTTAAATACTGGCGCTGAAGTTATGAAGCCAGCAGTTGATGAAATGTTTCCTGAGGGAGCTGGTCCGTATGTGGACCTGGATGAGGCAGGGGGCAGCACTGGACTGCTGATGGATCTGGCCGCCAATGAGAAGGCAGTGCACTCAGACTTTTTCAATGACTTTGAAGATCTATTTGATGACGATGATATTCAGTGATGAAGAGGACGAGTAGAACGGATTTCTCCACTGTATAAAATGTTCATTTTTGTACATTTAAGTGTTTTTTTCTCTACTTTAAGAGTGATATTGCATTAACTCTTCAGTTCATTAATAAACTTT

Function


symbol description
cops9 Predicted to be involved in cellular response to UV; negative regulation of protein neddylation; and positive regulation of cell population proliferation. Predicted to be located in chromatin; cytoplasm; and nucleoplasm. Predicted to be part of COP9 signalosome. Orthologous to human COPS9 (COP9 signalosome subunit 9).

GO:

id name namespace
GO:0005575 cellular_component cellular_component

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000082_00135087_00136976.mRNA False 1086 mRNA 0.24 3 134968 137769
TU334567 True 349 lncRNA 0.39 3 134964 137028

Neighbor


gene id symbol gene type direction distance location
CI01000082_00127677_00131998 AND1 coding downstream 2970 127096 ~ 131998 (-)
CI01000082_00137937_00138124 NA coding upstream 38 137461 ~ 138124 (-)
CI01000082_00139607_00140545 APODB coding upstream 1681 139450 ~ 140647 (-)
CI01000082_00159413_00161182 LRRC31 coding upstream 21487 159256 ~ 161182 (-)
CI01000082_00167971_00175044 NA coding upstream 28771 166540 ~ 175098 (-)
CI01000082_00179900_00182182 NA coding upstream 42104 179873 ~ 183490 (-)
G294684 NA non-coding downstream 38124 96629 ~ 96844 (-)
G294681 NA non-coding downstream 40159 93897 ~ 94809 (-)
G294669 NA non-coding downstream 94977 39754 ~ 39991 (-)
G294664 NA non-coding downstream 108002 25312 ~ 26966 (-)
G294660 NA non-coding downstream 115702 18947 ~ 19266 (-)
G294737 NA non-coding upstream 273651 411420 ~ 411645 (-)
G294739 NA non-coding upstream 275769 413538 ~ 413770 (-)
G294715 NA non-coding upstream 277033 414802 ~ 416442 (-)
CI01000082_00445788_00458726 STAG1, STAG1A, STAG1B non-coding upstream 307049 444474 ~ 458726 (-)
G294792 NA non-coding upstream 415790 553559 ~ 568318 (-)
CI01000082_00597462_00611609 ZMYND11 other upstream 468170 596319 ~ 611625 (-)
CI01000082_00678125_00678798 NA other upstream 502244 677628 ~ 678839 (-)
CI01000082_00666387_00667509 NA other upstream 528347 665937 ~ 667840 (-)
G294821 NA other upstream 532715 670484 ~ 671462 (-)
CI01000082_00689066_00690051 NA other upstream 551091 688512 ~ 690121 (-)
G294718 NA non-coding upstream 433 138424 ~ 139202 (-)

Expression



Co-expression Network