CI01000082_00666387_00667509


Basic Information

Item Value
gene id CI01000082_00666387_00667509
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000082
NCBI id null
chromosome length 5120761
location 665937 ~ 667840 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000082_00666387_00667509.mRNA
ACAGCTGAGAAGAGAAGCTGTTTGACAATCCTCAAACGTGAACCCACGAGGGCAGAGAATGCAGTAAGTACACTTTCCAAGATTCTGATTGGCTAAGAATTGTCTGCTTGTCTGTTTGACAAATCTACTCATTCTATTTCTTTACTAATGTGTATTAAAAGCTTTGAATACAATCATACATTACAGTTAGGTCTTTTTTTTTTCTTGTCAAATCAAGCTTTCATTGGGCAACACTGTGTTTCTGTGACAAAATACGAATGATTTTCGTACCTAGCTTTCAATTTAAAAGTTCAAAGTGTAAAAGTTCAAACGTTTATAAGTCTCAGAAAATGCCAGAATCAAATAATTATGTTCAACTGCACACCACACCCAAAAACTTTTACAATACTTTAATATCTCAGTCAACGTGCATCTCATGCATCCTCCTGCTGATTCACATCATCAGCAAAGTGAATGGAGATATCAAAAGAGCCCATCAGGGTACCAACATTACATTATCTTGTGAAGGCACAGGGAGTGATATAGAGGATAAAGCAAAGGTAAATGCACTTTGGAAAAAGGAGACTGGTCAGAGGGTGATCTGGAGATATTCTGGAGTGATAACAACAGCTGATACTTTCCACAACAGGACATTTGACATTAATGAAAATTTGGCCCTTGTTATTGATAAATGCGATAAATCAGACCAGGAAAGATGTAAAAGGTCCACAGAAAAACTGTGTAATGATAAATCCACTGATACAACACAAGATCTTACAGTTGCAGATAAAAAAGATAAAGATTCACAAAGGACTCACTTCACAATTGTGGGGCCAATACTCTTGGTTGTCATTCCTTTGGTTGCTTTATACACCAAGAGAAACTGCATTACTACAAAAAATGACAAATCAGAACTCGGAGTTCTCCATCCTCATACAGTCATTCAGATCAACTGAGCATCAGAATTTATCCTCTGATTTTAGCAAAAATATTACACTGAGGGAAAACAATTTTAGAATTAGAACTGTAAATAGTTGTATAAACTTAATTCTATACAATTTGTGTACTGTAAATGTTATATCAAATGATGATTTAACTTTAGAGAATATATGCGCTGTGGAGTTCAGCAAATTGCAATTTAGTGTTGTACATTTTAATGTGAACTATGTAAAATTATTTTTACTTTTTAGAAAGCCATATATATTTCAACTTTTATTTTTATATTTAAGTATGAACATGTTTAACCATATTTTTACACTTCTTAGTGTAATTATTTATTTTCATTTAATGAAAATATTTATATACATATTATATATACTTCAATCTGTAATTTTATATTTTAAAAATATGTATAACCATAATTTTACATTTTACAGTGTAATAATTAGTTATTTTCATTTAATAAA
>TU334751
ACACAGCTGAGAAGAGAAGCTGTTTGACAATCCTCAAACGTGAACCCACGAGGGCAGAGAATGCAGTCAACGTGCATCTCATGCATCCTCCTGCTGATTCACATCATCAGCAAAGTGAATGGAGATATCAAAAGAGCCCATCAGGGTACCAACATTACATTATCTTGTGAAGGCACAGGGAGTGATATAGAGGATAAAGCAAAGGTAAATGCACTTTGGAAAAAGGAGACTGGTCAGAGGGTGATCTGGAGATATTCTGGAGTGATAACAACAGCTGATACTTTCCACAACAGGACATTTGACATTAATGAAAATTTGGCCCTTGTTATTGATAAATGCGATAAATCAGACCAGGGTGTGTATATACTCTGCGTTAATGGGAAACCATACTGTGAAGTTCGCCTACTTGTCACTGAAAGATGTAAAAGGTCCACAGAAAAACTGTGTAATGATAAATCCACTGATACAACACAAGATCTTACAGTTGCAGATAAAAAAGATAAAGATTCACAAAGGACTCACTTCACAATTGTGGGGCCAATACTCTTGGTTGTCATTCCTTTGGTTGCTTTATACACCAAGAGAAACTGCATTACTACAAAAAATGACAAATCAGAACTCGGAGTTCTCCATCCTCATACAGTCATTCAGATCAACTGAGCATCAGAATTTATCCTCTGATTTTAGCAAAAATATTACACTGAGGGAAAACAATTTTAGAATTAGAACTGTAAATAGTTGTATAAACTTAATTCTATACAATTTGTGTACTGTAAATGTTATATCAAATGATGATTTAACTTTAGAGAATATATGCGCTGTGGAGTTCAGCAAATTGCAATTTAGTGTTGTACATTTTAATGTGAACTATGTAAAATTATTTTTACTTTTTAGAAAGCCATATATATTTCAACTTTTATTTTTATATTTA

Function

NR:

description
PREDICTED: uncharacterized protein LOC107586762

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000082_00666387_00667509.mRNA False 1385 mRNA 0.31 6 665937 667838
TU334751 True 931 TUCP 0.36 6 666116 667840

Neighbor

gene id symbol gene type direction distance location
CI01000082_00597462_00611609 ZMYND11 coding downstream 54328 596319 ~ 611625 (-)
CI01000082_00445788_00458726 STAG1, STAG1A, STAG1B coding downstream 207211 444474 ~ 458726 (-)
CI01000082_00439306_00442252 MSL2B coding downstream 223103 439159 ~ 442834 (-)
CI01000082_00393974_00398069 NA coding downstream 267561 393923 ~ 398376 (-)
CI01000082_00347180_00377462 FNDC3BB coding downstream 288475 345891 ~ 377462 (-)
CI01000082_00678125_00678798 NA coding upstream 10272 677628 ~ 678839 (-)
CI01000082_00689066_00690051 NA coding upstream 20674 688512 ~ 690121 (-)
CI01000082_00691711_00692356 NA coding upstream 23805 691643 ~ 692356 (-)
CI01000082_00692849_00695595 NA coding upstream 24933 692771 ~ 695766 (-)
CI01000082_00847325_00903986 HS6ST1B, HS6ST1, HS6ST1A coding upstream 179487 847325 ~ 903986 (-)
G294804 NA non-coding downstream 86850 577785 ~ 579087 (-)
G294803 NA non-coding downstream 89006 575216 ~ 576931 (-)
G294792 NA non-coding downstream 97619 553559 ~ 568318 (-)
G294715 NA non-coding downstream 249495 414802 ~ 416442 (-)
G294838 NA non-coding upstream 14617 682455 ~ 683048 (-)
G294841 NA non-coding upstream 29420 697258 ~ 697524 (-)
G294842 NA non-coding upstream 29910 697748 ~ 697958 (-)
G294844 NA non-coding upstream 31804 699642 ~ 699866 (-)
G294821 NA other upstream 2646 670484 ~ 671462 (-)
G296906 NA other upstream 1734981 2402819 ~ 2433912 (-)
CI01000082_02639529_02641582 NA other upstream 1970433 2638271 ~ 2641851 (-)
CI01000082_02829738_02840354 NA other upstream 2169364 2829738 ~ 2840354 (-)

Expression


Co-expression Network