CI01000082_00678125_00678798



Basic Information


Item Value
gene id CI01000082_00678125_00678798
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000082
NCBI id null
chromosome length 5120761
location 677628 ~ 678839 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000082_00678125_00678798.mRNA
TCTCAGGCACAAGAAGTGAAAGTTGAAGATCGACTGAGACAATGGAGACACAAAGGATCCTCATGAGGAGTTTGGCTGTTGTGTTCATTGCATCTGTGATCTGGACTATAACAGCACATCCTGTTGAAAAGGTGAACACATGCTGTACTGAAGTCTCCAATGCAGAGTTGACTGATCCTATCATCGGTTTCAGGCTGCAAAAACCAAATCCTCCATGTGTGAAGGCCGTCATCTTTCAGACTGAACGAGGAGAGTTCTGCTATGATTGGACACAACCATGGGTGCAGAAGAAAGTTAGGCAGTTTTTCAAAGCTCAAAGAAACAAACACCTGACTTCCACGCCACCACCAGCATCATCTATCAGTGAGCACACTCGTGTGAGAGGATCTACCCAATCAACTCATGCTCATGAATCATAAACATCTGAAAATAAA

Function


NR:

description
CC chemokine CK-2, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000082_00678125_00678798.mRNA False 434 mRNA 0.44 4 678110 678839

Neighbor


gene id symbol gene type direction distance location
CI01000082_00666387_00667509 NA coding downstream 10272 665937 ~ 667840 (-)
CI01000082_00597462_00611609 ZMYND11 coding downstream 66501 596319 ~ 611625 (-)
CI01000082_00445788_00458726 STAG1, STAG1A, STAG1B coding downstream 219384 444474 ~ 458726 (-)
CI01000082_00439306_00442252 MSL2B coding downstream 235276 439159 ~ 442834 (-)
CI01000082_00393974_00398069 NA coding downstream 279734 393923 ~ 398376 (-)
CI01000082_00689066_00690051 NA coding upstream 9673 688512 ~ 690121 (-)
CI01000082_00691711_00692356 NA coding upstream 12804 691643 ~ 692356 (-)
CI01000082_00692849_00695595 NA coding upstream 13932 692771 ~ 695766 (-)
CI01000082_00847325_00903986 HS6ST1B, HS6ST1, HS6ST1A coding upstream 168486 847325 ~ 903986 (-)
CI01000082_01040425_01063941 NA coding upstream 361401 1040240 ~ 1064660 (-)
G294804 NA non-coding downstream 99023 577785 ~ 579087 (-)
G294803 NA non-coding downstream 101179 575216 ~ 576931 (-)
G294792 NA non-coding downstream 109792 553559 ~ 568318 (-)
G294715 NA non-coding downstream 261668 414802 ~ 416442 (-)
G294838 NA non-coding upstream 3616 682455 ~ 683048 (-)
G294841 NA non-coding upstream 18419 697258 ~ 697524 (-)
G294842 NA non-coding upstream 18909 697748 ~ 697958 (-)
G294844 NA non-coding upstream 20803 699642 ~ 699866 (-)
G294821 NA other downstream 6648 670484 ~ 671462 (-)
G296906 NA other upstream 1723980 2402819 ~ 2433912 (-)
CI01000082_02639529_02641582 NA other upstream 1959432 2638271 ~ 2641851 (-)
CI01000082_02829738_02840354 NA other upstream 2158363 2829738 ~ 2840354 (-)
CI01000082_03329243_03330818 NA other upstream 2650295 3329134 ~ 3332093 (-)
CI01000082_00347180_00377462 FNDC3BB coding downstream 262551 345891 ~ 377462 (-)

Expression



Co-expression Network