CI01000082_00692849_00695595



Basic Information


Item Value
gene id CI01000082_00692849_00695595
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000082
NCBI id null
chromosome length 5120761
location 692771 ~ 695766 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000082_00692849_00695595.mRNA
ATTTGTGGAATTTCACAGCACACAGGATCCCTCAGAAATCATGCACCTGTACTCGGCATTTCATCAAATGATCATTTTGATTTGTTTGGTCATGCTCCTGTGTGCGTTTACATCAGGAGTGACCTCTCATGACCCTAAAAAGCCAATATGCTGCACAGCGCTCACGTTACATGAACCAAAGATGAAAATCAAAAGTTGTTACATCATTCCACCAAAAGGCAAATGTGTTGGCACTGTAGTGTTCATTGATATAATCAATCGGTTGCACTGCATCGATCCTAAGGCTCCATGGCTCAGTAAAAGGCAGGAACGTCTAAAAAAGAAGAATTTGAGTTATGGAGAATCTGAGTATGAGAATATTGTGAAATGGAAAAACTTGACCCATGCCATCTCACTGACTAGCAAAACTACCCAACAATCCTCTTGGGTGAAGAAACAGTAGGGTGTCAGCTCTTCCTTCCTTTTTTTCTTACAACTGGTCAACATTACAAGATAAAATATATTTGAATCACTGAATAAA

Function


NR:

description
chemokine CCL-C24c

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000082_00692849_00695595.mRNA False 520 mRNA 0.39 4 692771 695635

Neighbor


gene id symbol gene type direction distance location
CI01000082_00691711_00692356 NA coding downstream 415 691643 ~ 692356 (-)
CI01000082_00689066_00690051 NA coding downstream 2664 688512 ~ 690121 (-)
CI01000082_00678125_00678798 NA coding downstream 13932 677628 ~ 678839 (-)
CI01000082_00666387_00667509 NA coding downstream 24933 665937 ~ 667840 (-)
CI01000082_00597462_00611609 ZMYND11 coding downstream 81162 596319 ~ 611625 (-)
CI01000082_00847325_00903986 HS6ST1B, HS6ST1, HS6ST1A coding upstream 151690 847325 ~ 903986 (-)
CI01000082_01040425_01063941 NA coding upstream 344605 1040240 ~ 1064660 (-)
CI01000082_01094334_01094888 BCL2A coding upstream 398699 1094334 ~ 1095207 (-)
CI01000082_01097596_01106806 NA coding upstream 401836 1097471 ~ 1106806 (-)
CI01000082_01113178_01153900 PRKAG2A, PRKAG2 coding upstream 417543 1113178 ~ 1153900 (-)
G294838 NA non-coding downstream 9723 682455 ~ 683048 (-)
G294804 NA non-coding downstream 113684 577785 ~ 579087 (-)
G294803 NA non-coding downstream 115840 575216 ~ 576931 (-)
G294792 NA non-coding downstream 124453 553559 ~ 568318 (-)
CI01000082_00445788_00458726 STAG1, STAG1A, STAG1B non-coding downstream 246417 444474 ~ 458726 (-)
G294841 NA non-coding upstream 1623 697258 ~ 697524 (-)
G294842 NA non-coding upstream 2113 697748 ~ 697958 (-)
G294844 NA non-coding upstream 4007 699642 ~ 699866 (-)
G294847 NA non-coding upstream 9771 705406 ~ 705745 (-)
G294853 NA non-coding upstream 16156 711791 ~ 713072 (-)
G294821 NA other downstream 21309 670484 ~ 671462 (-)
G296906 NA other upstream 1707184 2402819 ~ 2433912 (-)
CI01000082_02639529_02641582 NA other upstream 1942636 2638271 ~ 2641851 (-)
CI01000082_02829738_02840354 NA other upstream 2141567 2829738 ~ 2840354 (-)
CI01000082_03329243_03330818 NA other upstream 2633499 3329134 ~ 3332093 (-)
CI01000082_04002837_04008950 BRAFLDRAFT_115150, CDK5 other upstream 3311357 4001099 ~ 4009112 (-)

Expression



Co-expression Network