CI01000082_01113178_01153900 (PRKAG2A, PRKAG2)


Basic Information

Item Value
gene id CI01000082_01113178_01153900
gene name PRKAG2A, PRKAG2
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000082
NCBI id null
chromosome length 5120761
location 1113178 ~ 1153900 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000082_01113178_01153900.mRNA
ATGAAACGATTTAGCAGCCTGAGAGGGATCAAAAAGCGCAAGGACCAAGAGGGGCGGACAGGAAGACGGCAGTCAGAGCCCCACGGCCTCCTGGGAACCACCTCTGGGATCTCCTCATCACCCACCACTCCAACACAACTGACCAAGCAGACTTCGGCGTTTCTTCTGGAAGTCAGTCAGAATGACACCGTGCACCGCTCCTCCTCCTCTCCCCTCGACACCGGACAGCACCACAGCCCGCCTACTGCAAAACCACCGCCCAGTCCGTGCTCAGCACATATATCTACCTCACGCGCGGTCCACGGTTTATCCGAAGACATGCTGGAGAAACTCGACCTCGAAGATGAAGCTGTTGAACAATCCGAGAGCGACATTTACATGCGTTTTATGAAGTTGCATAAGTGCTATGACATCGTACCTACCAGCTCCAAGCTAGTGGTCTTTGACACAACGCTGCAGGTTAAAAAGGCCTTTTTTGCCTTGGTGGCCAATGGGGTCCGAGCAGCCCCTCTGTGGGAGACCAAGAAACAAAGTTTTGTGGGCATGCTAACCATCACAGACTTCATCAACATACTTCACAGATACTACAAATCACCCATGGTACAAATCTATGAGCTTGAGGAGCATAAAATTGAGACGTGGAGAGAGCTCTATCTACAAGAAACATTTAAGCCTTTAGTGAACATATCTCCAGATGCAAGCATATTTGATGCTGTGTATTCACTGATCAAAAACAAGATTCACCGGTTGCCCGTCATCGACCCCGTCAGTGGAAATGCACTTTATATTTTGACGCACAAAAGGATCCTGAAATTCCTTCAGCTGTTTGTATGTGAGATGCCAAAGCCCGCCTTTATGAAGCAGACACTGGAGGAGCTGAGCATCGGGACCTACAGCAACATCGCCTTCATTCACCCCGACACGCCAATCATCAAAGCACTCAGCATCTTTGTGGAGAGGAGAGTGTCAGCACTGCCTGTGGTGGATGAGTCAGGAAAAGTTGTGGATATTTATTCCAAATTTGATGTCATTAATCTTGCTGCTGAAAAGACGTACAACAACCTGGACATTAGTGTGACACAGGCTCTGATGCACAGGTCACAGTACTTTGAAGGGGTCATGAAATGCAACAGATTAGAGACACTGGAAACGATAGTAGATCGGATAGTCAAGGCCGAGGTGCACAGGCTGGTGGTGGTGGATGAGAATGGCAGCATTGTGGGCATCGTCTCTCTGTCGGACATCCTCCAGGCGCTCGTTCTTAACCCCGCAGGTATA

Function

symbol description
prkag2a Predicted to enable AMP binding activity; protein kinase binding activity; and protein kinase regulator activity. Predicted to be involved in cellular response to glucose starvation; protein phosphorylation; and regulation of catalytic activity. Predicted to act upstream of or within regulation of protein serine/threonine kinase activity. Predicted to be part of nucleotide-activated protein kinase complex. Predicted to be active in cytoplasm and nucleus. Human ortholog(s) of this gene implicated in Wolff-Parkinson-White syndrome; glycogen storage disease; hypertrophic cardiomyopathy 6; and lethal congenital glycogen storage disease of heart. Orthologous to human PRKAG2 (protein kinase AMP-activated non-catalytic subunit gamma 2).
prkag2 Enables adenyl ribonucleotide binding activity; protein kinase binding activity; and protein kinase regulator activity. Involved in several processes, including glycogen metabolic process; regulation of fatty acid metabolic process; and regulation of phosphorylation. Located in extracellular space. Part of nucleotide-activated protein kinase complex. Implicated in Wolff-Parkinson-White syndrome; glycogen storage disease; hypertrophic cardiomyopathy 6; and lethal congenital glycogen storage disease of heart.

GO: NA

KEGG:

id description
K07200 PRKAG; 5'-AMP-activated protein kinase, regulatory gamma subunit

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000082_01113178_01153900.mRNA True 1278 mRNA 0.49 13 1113178 1153900

Neighbor

gene id symbol gene type direction distance location
CI01000082_01097596_01106806 NA coding downstream 6372 1097471 ~ 1106806 (-)
CI01000082_01094334_01094888 BCL2A coding downstream 17971 1094334 ~ 1095207 (-)
CI01000082_01040425_01063941 NA coding downstream 48518 1040240 ~ 1064660 (-)
CI01000082_00847325_00903986 HS6ST1B, HS6ST1, HS6ST1A coding downstream 209192 847325 ~ 903986 (-)
CI01000082_00692849_00695595 NA coding downstream 417543 692771 ~ 695766 (-)
CI01000082_01164665_01166814 NA coding upstream 10574 1164474 ~ 1166814 (-)
CI01000082_01199588_01202126 NRROS coding upstream 45522 1199422 ~ 1203642 (-)
CI01000082_01211221_01216257 FBXO45 coding upstream 56636 1210536 ~ 1216493 (-)
CI01000082_01230554_01235723 NA coding upstream 75614 1229514 ~ 1235739 (-)
CI01000082_01300876_01305478 TECRL2A coding upstream 146667 1300567 ~ 1305478 (-)
G295146 NA non-coding downstream 143336 969604 ~ 969842 (-)
G295143 NA non-coding downstream 147432 965538 ~ 965746 (-)
G295116 NA non-coding downstream 201894 911073 ~ 911284 (-)
G294858 NA non-coding downstream 390957 721999 ~ 722221 (-)
G294853 NA non-coding downstream 400106 711791 ~ 713072 (-)
G295163 NA non-coding upstream 35508 1189408 ~ 1190566 (-)
G295225 NA non-coding upstream 147846 1301746 ~ 1301947 (-)
G295229 NA non-coding upstream 156392 1310292 ~ 1310536 (-)
G295237 NA non-coding upstream 166601 1320501 ~ 1320732 (-)
G295243 NA non-coding upstream 193059 1346959 ~ 1347268 (-)
CI01000082_00689066_00690051 NA other downstream 422744 688512 ~ 690121 (-)
CI01000082_00678125_00678798 NA other downstream 430872 677628 ~ 678839 (-)
G294821 NA other downstream 441716 670484 ~ 671462 (-)
CI01000082_00666387_00667509 NA other downstream 445338 665937 ~ 667840 (-)
CI01000082_00597462_00611609 ZMYND11 other downstream 501553 596319 ~ 611625 (-)
G296906 NA other upstream 1248919 2402819 ~ 2433912 (-)
CI01000082_02639529_02641582 NA other upstream 1484371 2638271 ~ 2641851 (-)
CI01000082_02829738_02840354 NA other upstream 1683302 2829738 ~ 2840354 (-)
CI01000082_03329243_03330818 NA other upstream 2175234 3329134 ~ 3332093 (-)
CI01000082_04002837_04008950 BRAFLDRAFT_115150, CDK5 other upstream 2853092 4001099 ~ 4009112 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
mexican tetra (Astyanax mexicanus) G19112 prkag2a,prkag2,LOC108434244,LOC106590432 non-coding NC_035899.1 CM008302.1 15212833 ~ 15233668 (-)