CI01000082_01164665_01166814


Basic Information

Item Value
gene id CI01000082_01164665_01166814
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000082
NCBI id null
chromosome length 5120761
location 1164474 ~ 1166814 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000082_01164665_01166814.mRNA
GGGGAGCCTAGCTGCCGTTCAGCCAGTCCGACCAAAACCTTCTTCAGTCGGAGTCCTTTTAGCCGGCCCTCTAGCCCTATGTCTGCACCACCCCGGTCCAGAAACAGCCCTGGATCTCCCAAAACCATCTTCCCCTACTCCTCCAACAGCGACTCCTCACCCAAGTGTTCACGTCGCCGCAGCTTCACCGGAATCTTCCGTTCATCCTCCAAAGAGTCCACAAATCCCTCTACATCTCCTGTCAGCAGCAAACTCTTCTCTCGGGCCAGGAAAGACCATGATAATGAATTCAGCTGTCACATACGTTATCCACGCAAGTCTGATTTAACGATCACAACCAAGAGGAGGGAGAACGCAATACATAAATAGCTGTTTTTTAGTAGTTTAGTTTATACTATTTGAAGAGCTTACTCAGTCATACATATAAACCATTTAAAGTTCCCTGAGAATTATATCTTAAAATTTTTTAGTAATTGTATTATGATATATACGGTTATGATATAAAGTTACGTTGCTGTCCGTGATATACTGTAGGTTTGTGGTCAAAACTCTAGATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000082_01164665_01166814.mRNA True 560 mRNA 0.44 2 1164474 1166814

Neighbor

gene id symbol gene type direction distance location
CI01000082_01113178_01153900 PRKAG2A, PRKAG2 coding downstream 10574 1113178 ~ 1153900 (-)
CI01000082_01097596_01106806 NA coding downstream 57668 1097471 ~ 1106806 (-)
CI01000082_01094334_01094888 BCL2A coding downstream 69267 1094334 ~ 1095207 (-)
CI01000082_01040425_01063941 NA coding downstream 99814 1040240 ~ 1064660 (-)
CI01000082_00847325_00903986 HS6ST1B, HS6ST1, HS6ST1A coding downstream 260488 847325 ~ 903986 (-)
CI01000082_01199588_01202126 NRROS coding upstream 32608 1199422 ~ 1203642 (-)
CI01000082_01211221_01216257 FBXO45 coding upstream 43722 1210536 ~ 1216493 (-)
CI01000082_01230554_01235723 NA coding upstream 62700 1229514 ~ 1235739 (-)
CI01000082_01300876_01305478 TECRL2A coding upstream 133753 1300567 ~ 1305478 (-)
CI01000082_01330784_01334768 OLFM3, OLFM3A coding upstream 163439 1330253 ~ 1335190 (-)
G295146 NA non-coding downstream 194632 969604 ~ 969842 (-)
G295143 NA non-coding downstream 198728 965538 ~ 965746 (-)
G295116 NA non-coding downstream 253190 911073 ~ 911284 (-)
G294858 NA non-coding downstream 442253 721999 ~ 722221 (-)
G294853 NA non-coding downstream 451402 711791 ~ 713072 (-)
G295163 NA non-coding upstream 22594 1189408 ~ 1190566 (-)
G295225 NA non-coding upstream 134932 1301746 ~ 1301947 (-)
G295229 NA non-coding upstream 143478 1310292 ~ 1310536 (-)
G295237 NA non-coding upstream 153687 1320501 ~ 1320732 (-)
G295243 NA non-coding upstream 180145 1346959 ~ 1347268 (-)
CI01000082_00689066_00690051 NA other downstream 474040 688512 ~ 690121 (-)
CI01000082_00678125_00678798 NA other downstream 482168 677628 ~ 678839 (-)
G294821 NA other downstream 493012 670484 ~ 671462 (-)
CI01000082_00666387_00667509 NA other downstream 496634 665937 ~ 667840 (-)
CI01000082_00597462_00611609 ZMYND11 other downstream 552849 596319 ~ 611625 (-)
G296906 NA other upstream 1236005 2402819 ~ 2433912 (-)
CI01000082_02639529_02641582 NA other upstream 1471457 2638271 ~ 2641851 (-)
CI01000082_02829738_02840354 NA other upstream 1670388 2829738 ~ 2840354 (-)
CI01000082_03329243_03330818 NA other upstream 2162320 3329134 ~ 3332093 (-)
CI01000082_04002837_04008950 BRAFLDRAFT_115150, CDK5 other upstream 2840178 4001099 ~ 4009112 (-)

Expression


Co-expression Network