CI01000082_02172392_02173323


Basic Information

Item Value
gene id CI01000082_02172392_02173323
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000082
NCBI id null
chromosome length 5120761
location 2172378 ~ 2173582 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000082_02172392_02173323.mRNA
AGGTGATTTGAAGAATAAAAAATAACTCTGATTCTAAAACACACATATACATACATACATATTTCATATATATACACACATAGACACACACACACACACACACATACATACGTACATATATACAGTATATGTTTGTATGTACTTGGTTACTTGTGAATGGTCTTCAAGATGTTTTTTGGCTACCTGATGACCTTCTAATGACACTGATACTGTAGAGGCTAACTGGACCATGCTAATCAACCAATCCTTATGTGTTCAGATGAGAGATGAGCTGGACAAGACGGAGGACCGGCTGGAGTGGGCGAATAATGCACTCAAGAGCGACTGGACCCGCTGGCAGAAGGTCATGAGAACTGACCTACGATCAGCCTTCATCGACACAGCAGAGAGGAACGTCAGCTACTATGAAAAGGATTCTTCCTTTGCATTTTAGTCTTAAACAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000082_02172392_02173323.mRNA True 447 mRNA 0.40 2 2172378 2173582

Neighbor

gene id symbol gene type direction distance location
CI01000082_02065074_02095249 PLPPR4, LPPR4 coding downstream 77103 2064261 ~ 2095275 (-)
CI01000082_01976234_01986067 SYNC, NARS coding downstream 186311 1975811 ~ 1986067 (-)
CI01000082_01945468_01947837 NA coding downstream 224541 1943661 ~ 1947837 (-)
CI01000082_01885169_01923048 NA coding downstream 246778 1884321 ~ 1925600 (-)
CI01000082_01851564_01866686 NA coding downstream 305105 1851527 ~ 1867273 (-)
CI01000082_02175270_02187098 SNX7 coding upstream 1645 2175227 ~ 2188166 (-)
CI01000082_02295379_02298949 NA coding upstream 121560 2295142 ~ 2299324 (-)
CI01000082_02449770_02454344 NA coding upstream 276161 2449743 ~ 2455546 (-)
CI01000082_02499101_02514104 PTBP2, PTBP2A coding upstream 325024 2498606 ~ 2514104 (-)
CI01000082_02639529_02641582 NA coding upstream 465485 2638271 ~ 2641851 (-)
G296775 NA non-coding downstream 77425 2094722 ~ 2094953 (-)
G296773 NA non-coding downstream 78320 2093784 ~ 2094058 (-)
G296763 NA non-coding downstream 114243 2057726 ~ 2058135 (-)
G296742 NA non-coding downstream 130140 2038376 ~ 2042238 (-)
G296740 NA non-coding downstream 199561 1972506 ~ 1972817 (-)
G296820 NA non-coding upstream 53193 2226775 ~ 2231198 (-)
G296824 NA non-coding upstream 60208 2233790 ~ 2234533 (-)
G296934 NA non-coding upstream 292917 2466499 ~ 2466891 (-)
G296937 NA non-coding upstream 304408 2477990 ~ 2478222 (-)
G296939 NA non-coding upstream 306329 2479911 ~ 2480129 (-)
CI01000082_00689066_00690051 NA other downstream 1481944 688512 ~ 690121 (-)
CI01000082_00678125_00678798 NA other downstream 1490072 677628 ~ 678839 (-)
G294821 NA other downstream 1500916 670484 ~ 671462 (-)
CI01000082_00666387_00667509 NA other downstream 1504538 665937 ~ 667840 (-)
CI01000082_00597462_00611609 ZMYND11 other downstream 1560753 596319 ~ 611625 (-)
G296906 NA other upstream 229237 2402819 ~ 2433912 (-)
CI01000082_02829738_02840354 NA other upstream 663620 2829738 ~ 2840354 (-)
CI01000082_03329243_03330818 NA other upstream 1155552 3329134 ~ 3332093 (-)
CI01000082_04002837_04008950 BRAFLDRAFT_115150, CDK5 other upstream 1833410 4001099 ~ 4009112 (-)

Expression


Co-expression Network