CI01000082_03329243_03330818


Basic Information

Item Value
gene id CI01000082_03329243_03330818
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000082
NCBI id null
chromosome length 5120761
location 3329134 ~ 3332093 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000082_03329243_03330818.mRNA
AACATCAGTGACTCAGACTATTTCACAATGATAATAAAATCATCATCTGGTGTCATTAAAGCTTTCTTTGCTACTGTACACTTTCACAGCAGCCAGAGAAGATAAACATATTATGAGTTAAGAGTCCAATTAATGGAAACGACAATCACCATTATGGTGACTTCAAATGAAACAAACATGAGCGTTAAACTCTGTTAATTCTCTTTAAGAACTTCTGTAGATGAATTGCAGAAATAAGGTCAATCTGGTTAGTAATATGTGAAGCTGTAATGCTGTTTGTGGAGTTGTTTAACCCTCCTCTGCTGAGATCTGGAGAGATTTAATGTCTTCTTTTATCTTTGGTTGATTTCATCTAAGGCTGTGACAAGTCAGATGTAGCTCTTGTGTTTCTGTTTGTCTCTTTTTTCTGTTCTCTTCTTTCCTTCAGTGATTCTGCTTGTTAACAAGCTTGTTAATGCTAAGATGATTCTATAAATAACATATAAAGATTTTGTGGCTCAGATAAGGTCTAGTTCCGGTTTATTTCTTTACCCTTGGCTGACATGTGGCATTGCTATGGCCTGCTTGCGGCTCAGATTTGGCAAACAGGAGCGGTCTGCCCCAGGTGCCATTATTCCATTCCACATGTGGACCAGATCATCATACCATGTGTGGCAGATGTGAGCCGGCACAAAGTTGCTATCTTTATCTAGTTAGTTCAGGTTTTAACATTTACATTTATGTTCTTGACAGACTTGCTTTGGTTGGCATATGAATGGTTTAACAAGTGTCATGTTTAACTGGGTAGACAAGGATGAAGGTGCATGAAAAATCAACAAAACCACTTCACACACTCTCCATACACACTCCACATGGGAGGAGGAAACACCATTCACATCAGAGCAGAATAGAAAGACATCAAAGCCTGTCAGCAAACAATATGTCCACATTGTTTTCCATTATTATTCATTTTCTCTTGTTCACGCTCTCCATTGTGCTCGTAATGAGTTGTGGTGAGCGTGGATGCGTCGCAAATTGCAGAAATGGTTTATTGTTATCTTAAATATTATTATTAATGATGTGGTATGATTTAATTAAATGTAGATGGACACAAATCACAAGCAAATCGCTCAGTCGGAATCACTGCATTGACAACATTCTGTTTTAACATAATCTAGCTCAACAAACCATTTTGTTTAAATCACTGCAGAAAGTGTTGAAGTTGTTTCATTTACCTCGATGACGTGCGTTCGTGGAAGCTGGGATGACTGACACATGACAAGGACCCCTGTCACCATGACAACAGGCTCTAATGGAGACAGAATTGGAGGAGATGGGAACGCTGAAATGGACAATCAGAAGCACAGCTCCGAGGAACATCAGCAGGACAAACTGGGACAGAAGAAACCCCGCAGGAAAGACACTCCCGTACTCAACAGCCCTCCACTCATACCAGGCAAGACTTTGATTTCTCATCCTTTCACTCATGCATCACTCTCACACCCTCTCCATCCATCTCTCGCTGTCTCTTTGTCTCAGTTCCTTGCGTTTTTCTTTCGCAGGCGTGAGATTGATGAAGACAGAGGCACGAATGATTCATCAGGAGGATGAGGAGAAGGAGATGAAGAAGTAGATGTGTTGCAAAACATTCAGTTTTTGTTGTTGTTAGTGTTATTTTTGATCGTTGGCTGAGCCTTCATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000082_03329243_03330818.mRNA False 1683 mRNA 0.40 2 3329150 3332093

Neighbor

gene id symbol gene type direction distance location
CI01000082_03290868_03295427 NA coding downstream 32996 3290314 ~ 3296154 (-)
CI01000082_03217934_03225669 TRDMT1 coding downstream 103481 3217877 ~ 3225669 (-)
CI01000082_03216898_03217396 NA coding downstream 111419 3215507 ~ 3217731 (-)
CI01000082_03210506_03213453 CUBN coding downstream 115697 3210506 ~ 3213453 (-)
CI01000082_03207155_03210294 CUBN coding downstream 118856 3207155 ~ 3210294 (-)
CI01000082_03340985_03351365 CCDC129 coding upstream 8586 3340679 ~ 3351365 (-)
CI01000082_03399450_03399994 EIF1B, EIF1 coding upstream 67079 3399172 ~ 3399994 (-)
CI01000082_03420930_03425791 PTCHD3A coding upstream 88248 3420341 ~ 3425890 (-)
CI01000082_03431448_03433211 RDH12L, RDH12 coding upstream 99355 3431448 ~ 3433211 (-)
CI01000082_03460478_03466764 NA coding upstream 127949 3460042 ~ 3466821 (-)
G297243 NA non-coding downstream 21233 3304216 ~ 3307917 (-)
G297206 NA non-coding downstream 75429 3253373 ~ 3253721 (-)
G297170 NA non-coding downstream 93517 3232713 ~ 3235633 (-)
CI01000082_03136108_03172662 RSU1, RSU1.S non-coding downstream 156280 3135166 ~ 3172887 (-)
G297100 NA non-coding downstream 325976 2998250 ~ 3003174 (-)
G297298 NA non-coding upstream 136863 3468956 ~ 3470374 (-)
G297315 NA non-coding upstream 214885 3546978 ~ 3547720 (-)
G297289 NA non-coding upstream 239828 3571921 ~ 3576845 (-)
G297286 NA non-coding upstream 260392 3592485 ~ 3618325 (-)
G297316 NA non-coding upstream 298225 3630318 ~ 3630859 (-)
CI01000082_02829738_02840354 NA other downstream 490183 2829738 ~ 2840354 (-)
CI01000082_02639529_02641582 NA other downstream 687299 2638271 ~ 2641851 (-)
G296906 NA other downstream 895238 2402819 ~ 2433912 (-)
CI01000082_00689066_00690051 NA other downstream 2638716 688512 ~ 690121 (-)
G294821 NA other downstream 2657688 670484 ~ 671462 (-)
CI01000082_04002837_04008950 BRAFLDRAFT_115150, CDK5 other upstream 674899 4001099 ~ 4009112 (-)
CI01000082_04332255_04333022 NA other upstream 988417 4330173 ~ 4334359 (-)
CI01000082_04698358_04700580 NA other upstream 1366109 4697533 ~ 4700580 (-)

Expression


Co-expression Network