CI01000082_04306692_04308566



Basic Information


Item Value
gene id CI01000082_04306692_04308566
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000082
NCBI id null
chromosome length 5120761
location 4301266 ~ 4309336 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000082_04306692_04308566.mRNA
ACCACCCACATTTTTTTGAGAGTTTTTTTTATTTTATTTTGTTTTATTTTATTTATTTTTATTTTATTTTATTTTTATTTGTAATGATATAACTGATTTTATTATTTTAATTATTTAAATATTATTTTATTTATTAATAGTAAATTAATGTATTGATTTATTTATATTTTTAATGATATGAATGATTTAAAGGATTTTATTTATCTTAATATTATTTTTTTCTGTATTTTATTATTATTTATTAATTTGACCATTATTTTATTCAGCATAATCTTTTCTTGAAATATATTGTATCACAATATTTTTGTTGTGGTTGATGGAATAGAACTAAAGACTGCAGATTTTATGCATTCATAAGACCTCCAGATGTTTGCTTTATGAATTCTTAAAATGTTCATTTTATATAACCTGCATTATTGTATTACTTAATGCATTAACATTGCATCTTCCATTGGATCTCTGTGTGGCTTTAATTTACATCTGCTCATGAGGCATAAAAAAGAAAACAATAATATATTTTTTTTTATACCAGCCATCAGGATTCCTTCGAGTCTTTTAATGTTATCATCAAATGACTCAAATATCTGAAATTGGGCTATCTTTGCGCACAAGAAAATGTTTCATAACACTGTTCAGATCACACTTATACTATCACACGTACTAGCTGAAGACCCAGAGCCCTCATTAGGTGTCAGGGTGAAGCAGTGATATCTATAGCCTGTTCCACAGAGCACTGATGCTACTCGTACCATCTTTATCACAGCGCTGTGATGTGGAAATCGCCCCGTTGTGAATGTGGACACTCCTTCAGAGAGCTCGTGTGGGAGAGAGTGTTTGAGAGTAACAGAGGGTCACATCGACCTCAGGAGTGTCCAGTGAGCTCACAGGAGGTCTTGTATTACAGCCAATGGGCTGTCCCGACTCAGTTCACTACAGCCTGTTTGACTGTAACTCTGGCAGAAGGAAGCCGTTGCCTGTGGTTTCTCCGAGCTCTTGGCAGGGCTGAGCCGTGTAGCATGGGTTGGCTGGAGCATCTCTTGAAGGACCGCCAGACCTTGGAGCTGACGCAACTCTTTCCACGCTAGTTACATTCGACATTTCAGCACCGCAGATTTCCTCTGTAGAATTGAGTGAAAAAGACATGTTGTGGTAACGTGTATATAGCCTACGTGTACGAATTTTCAGGAAAATCTGCCTTGAAGGGCCCATGAAATCAAAATTGTAGTTTTATTGCTTTCAGAACATGTCTGTTAGCTTTAAGGGTTTTTTGTAAGGAAATTAATACTTTTATTGAGCAAGGATGCATTAAATTGATCAAAAGTGACAGTAAAGAAAAACGTTTTATAATATGCAGAAAATCAGCATATTAGAATGATTTCTGAAGGATCATGTGACACTGAAGACTGGAGCAATGATGCTAAAAATTCAGCTTTAATATAAATGACATTTTAAAAAATATTATAATAGAAATTACCTATTTAAAAGTTTTCACGATATTACTGTTTTTACAGAATTTTTGATAAAATAAATGCAGCTTTTCTTGGTGAGACTGAGAAGTGAGAATTTTAGCATTGGTGCCAATTTTTGAGTTGGCTGTGAGCAACATGTCAAGCTCTTCCTGAGCCAAAACCTTTCATCAAAAATTGGCTATTACTAAATGATCAGAATAAA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000082_04306692_04308566.mRNA False 1671 mRNA 0.34 3 4306106 4309336

Neighbor


gene id symbol gene type direction distance location
CI01000082_04166987_04239812 AGAP3 coding downstream 66294 4166065 ~ 4239812 (-)
CI01000082_04114096_04116464 NA coding downstream 189642 4113357 ~ 4116464 (-)
CI01000082_04076831_04078585 NA coding downstream 225976 4076540 ~ 4080130 (-)
CI01000082_04046715_04059602 ASIC1C, ASIC3, SCNN1A coding downstream 244852 4046425 ~ 4061254 (-)
CI01000082_04009852_04017883 ABCB8 coding downstream 288151 4009715 ~ 4017955 (-)
CI01000082_04332255_04333022 NA coding upstream 21969 4330173 ~ 4334359 (-)
CI01000082_04374470_04376138 NA coding upstream 65001 4374337 ~ 4378723 (-)
CI01000082_04476837_04498244 SNTG1 coding upstream 167027 4476363 ~ 4498244 (-)
CI01000082_04569902_04593680 NA coding upstream 260405 4569741 ~ 4595609 (-)
CI01000082_04604289_04607362 UBE2V2, UB2V2 coding upstream 294496 4603832 ~ 4607362 (-)
G297440 NA non-coding downstream 25732 4278140 ~ 4280374 (-)
G297438 NA non-coding downstream 55853 4247403 ~ 4250253 (-)
G297445 NA non-coding downstream 103054 4202517 ~ 4203052 (-)
CI01000082_04002837_04008950 BRAFLDRAFT_115150, CDK5 non-coding downstream 302710 4001099 ~ 4009112 (-)
G297450 NA non-coding upstream 996 4310332 ~ 4311892 (-)
G297465 NA non-coding upstream 82325 4391661 ~ 4409294 (-)
G297556 NA non-coding upstream 282013 4591349 ~ 4591851 (-)
G297559 NA non-coding upstream 286389 4595725 ~ 4595936 (-)
G297561 NA non-coding upstream 287701 4597037 ~ 4597378 (-)
CI01000082_03329243_03330818 NA other downstream 975355 3329134 ~ 3332093 (-)
CI01000082_02829738_02840354 NA other downstream 1467139 2829738 ~ 2840354 (-)
CI01000082_02639529_02641582 NA other downstream 1664255 2638271 ~ 2641851 (-)
G296906 NA other downstream 1872194 2402819 ~ 2433912 (-)
CI01000082_04698358_04700580 NA other upstream 388866 4697533 ~ 4700580 (-)

Expression



Co-expression Network