CI01000082_04374470_04376138


Basic Information

Item Value
gene id CI01000082_04374470_04376138
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000082
NCBI id null
chromosome length 5120761
location 4374337 ~ 4378723 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000082_04374470_04376138.mRNA
ATGGACGATATTTAGGACTTCCTTCTTCAGCCATCTTTCTGAACTTCTCCTCAAATGGCATTTCCATTTGAAGTCAGTTAGCGTAATTTGAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGTCTGTCTGTGTCTATCATCCATCCATCTATCCATCCATCCATATATCTATCTATCTCTGTCTGTGTCTATCATCCATCCATCTATCCATCTATCCATCTATCTATCATCCATCCATCATCTATCTATCTATCTATCTATCTATGTCTGTGTCTATCATCCATCCATCTATTCATCTATCTATCTATCTATCATCCATCCATCATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTCTGTCTGTGTCTATCATCCATCCATCTATTCATCCATCCATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCATCCATCCATCATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCCATCTTTCTATCTATCTATCTATATCTGCCATACTGGAATAAGATAATCAAAACAAAAACATAATAGCATTGATGAAAATGTAAGTTACTTATTGTTGGCAAAATCTACTCAACATTTTACTGAATAGTGATTCATTCTGAAGTGAGAATCATGTTTAAGCTTATATCACCTGAAACAGAGATGATGCATGACATAAAAAGCAGAAATAAAACAAGAATTAAAAATAATTTCTGCATATTGGCTATAAGACACAGAGACAAAAATATCTGGTATTGTTCATTAAAAAGGTTGATTTTTAGTTCTGTTCTAACTCTTGCACTTTTAACATTAAAGGTCTTTTTTATAACAGCTTAATTTAGAACAGAAAGAAGCTAAGCTTCAACCAAAGATCCAAGATTTGTTCAAGATTAAAACTAAATGCTTCAAAAAAATAAATCACTGGCAAGTACAATACGGTTATTTTTTAAATAACTTTAGGACCCTTGCAAGTAAAAGATTATTCATGCATCATAGCTACACACATTTTGTAATGGCAAGGTTTAATCACTGATGTGATCGGTAAATATGCACTCTCTCATTGTTAGCTTTAGCAATTGCTAAACTATTGACACTTGCCAGTTGGCATTTGAACTGACATTAGCGCGACGCTAGCCGACGCTAATACGATACTGCTCAGACGAAGGCAAAGTGGTAAACAGGCTGAATAAATGTTTCCTCATAAACAGCTCTAAAATATATCATCAACAGCAAGCACACTCTTATATTCATAACATCCATATTCATCCATTTGGGAATGATAGATTCGCTTGATCCTCTGTTGTCGGTCTTAACGCTGGCAAAAGTGCTCTATAATTATTGCTCTCGGCACCAGGCTGAGACAAATAAAAGTTACATCGCAGCTGCATTAACATGTGAATGCGGCTTACAGAAGCGCGCGCGGTAAACTGCTCCACCTGGCTCGCGACAAACGTCCTTGTCACAAAGTCCACCCACCGCACTGGCTTCCGCTGAAAGGCCTCCTGGGGGACTTCAGTGACCATTCACTATGTTTTCTCTTTTCCCAAGCACCTGTGACTGTTTTTGTGCTTTCCCATTTTTTTCTGCCTTTGTCTCTCTCTCTGCCTCTCTCGTTTTTTTTTTTTGTTTTTGTTTTTTTTTTTGGCAGGGCCCTATCATTAGGGAAACACTTTCTTTCAAAAGGAATTCTCGCCACTAACAATGCTGTTTGTGTGTTTACCAGGGGAGGCAGGACTCCGAACGCATCCAAAAAACATGTCACGGTCACGCGGACGCACAGGAAACGTGGGAAAAGGTGGGCCACGGCGGTCACTCCTTGCCTTTCTTGGGCAGGTGCAGTTGGAAAGACTCGCCTCCTCTGCCGCTTCCGAAGGCTCATCCGGCTTCTCCATGGTCCTGGACCTTGGAGAGCTGCTTTGCCATTTTCCAAAGGAGTTTGGCACAATGGCTTTGTCCCCTCTTTTCATTGTGTTTCTCCCGGGCAGGTCCGGTGGCAGTGAAACGCATTGTCGAGCATCATACAAAAGAGGCTTAAGGAATCTGAATGCAGGGAAGCTATGTAACTTGCTGACTAACTTTGTCCTCTGTTTTGATGGAGAACACAATGGAAAACGCTGTCCATTCAAATCAGGCAGGGGAACAGAGGGGGCCGTGTGCCCTGATAACAGCTCTGAGGGCACAGCAGCACTGGCACCGGGCGACACCACACCACTCACGCCCAACAGAACAACTTTTGTGCCGTTGTCATGCTCCAGAAGTTTGTCTTCTTCTGCAACTAGTTCCCCCCCATCCACCCAGCGGCTGCAAACTTGTACAGTTGTGCTTTTGATTCAAACAGCTGCCGTTCCTCGGCTTCGGCTTCTGCTTCCGCTCGATTATAAGGGACATAGAGGGCCTGTTGTCTGTTGAAAGAGTCGAGTTTAGTGGTTAAAATGTACTTTTTGAATTCAGATTGAAAATTAAGACCCTTAGTGATCTTTGATGACCTTTAAAAAGTGACCTTTGTCAACATGACGTAAAAAATTTAAGTTTCTTCATTAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000082_04374470_04376138.mRNA True 3426 mRNA 0.30 2 4374337 4378723

Neighbor

gene id symbol gene type direction distance location
CI01000082_04332255_04333022 NA coding downstream 39978 4330173 ~ 4334359 (-)
CI01000082_04306692_04308566 NA coding downstream 65001 4301266 ~ 4309336 (-)
CI01000082_04166987_04239812 AGAP3 coding downstream 134525 4166065 ~ 4239812 (-)
CI01000082_04114096_04116464 NA coding downstream 257873 4113357 ~ 4116464 (-)
CI01000082_04076831_04078585 NA coding downstream 294207 4076540 ~ 4080130 (-)
CI01000082_04476837_04498244 SNTG1 coding upstream 97640 4476363 ~ 4498244 (-)
CI01000082_04569902_04593680 NA coding upstream 191018 4569741 ~ 4595609 (-)
CI01000082_04604289_04607362 UBE2V2, UB2V2 coding upstream 225109 4603832 ~ 4607362 (-)
CI01000082_04610319_04618566 MCM4.L, MCM4.S, MCM4 coding upstream 231477 4610200 ~ 4618566 (-)
CI01000082_04622132_04622407 NA coding upstream 243051 4621774 ~ 4622407 (-)
G297450 NA non-coding downstream 62445 4310332 ~ 4311892 (-)
G297440 NA non-coding downstream 93963 4278140 ~ 4280374 (-)
G297438 NA non-coding downstream 124084 4247403 ~ 4250253 (-)
G297445 NA non-coding downstream 171285 4202517 ~ 4203052 (-)
G297465 NA non-coding upstream 12938 4391661 ~ 4409294 (-)
G297556 NA non-coding upstream 212626 4591349 ~ 4591851 (-)
G297559 NA non-coding upstream 217002 4595725 ~ 4595936 (-)
G297561 NA non-coding upstream 218314 4597037 ~ 4597378 (-)
G297497 NA non-coding upstream 240516 4619239 ~ 4619480 (-)
CI01000082_04002837_04008950 BRAFLDRAFT_115150, CDK5 other downstream 365225 4001099 ~ 4009112 (-)
CI01000082_03329243_03330818 NA other downstream 1043586 3329134 ~ 3332093 (-)
CI01000082_02829738_02840354 NA other downstream 1535370 2829738 ~ 2840354 (-)
CI01000082_02639529_02641582 NA other downstream 1732486 2638271 ~ 2641851 (-)
CI01000082_04698358_04700580 NA other upstream 319479 4697533 ~ 4700580 (-)

Expression


Co-expression Network