XLOC_010788 (lmna)


Basic Information

Item Value
gene id XLOC_010788
gene name lmna
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 30520357 ~ 30570161 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00021099
GAACTATTTTGGCTGCTCTTCTGTGCCCAGCTATTTAGATTTAGAGTTAGCCGAAGCCTGCAGTCACTAGTAGCTACTGCTCTTTTGATTTGAGACACTCTTTAAAAAGTTGCTAAATGAAgccaaatgaatgttaaaaatagCTAAATTTGTTGCTGGGTGCTTTTAGGGAAACAAGCTAGGGTATTATGACAAGTTGCTAAAAAGTTAGCAACCAGGGTTTTACAGGGTTTTGTCAATCAGACTTTCAGTTAAATAGTcttgacctaatgtttcatgtagcCAAATGTCtatgtgctaaaaaaaataagaataagttAGCAAATCttaccttttgtttgttttgatcagAATCATGAGGATCTTTCACAGTCACTATAATGCTAAGAAAATAAGGCATATACATCAAGCTACTAAAATTTTCATTGCTATTCGTCAAGTTACTAAAtgggagcctgataaaaatgtgtgatttttttaataCTTCAGTCAAAATTCATTACCTGTGTATGTTTTTGTAGACCACGGTAAATTTCTGCGTTTCTATGTATCGGCCACTAGAGGACGCCGCACGATTCCATCATTCTGCTGCACTCACTGCTCTGCTAGTGTGCGGCGATGGTGGATCCATGACGCCTGCAAACAATTCCTGATTTTGGGCTTCGGCAACTtaTCAGTAGTTCCAGACAACCATGGAGACTCCAGGTCAGAAACGAAGCAGCCGCGGTGGGGTGACCAATGTCCTGTCCCCTACCCGCATCTCTCGATTGCAGGAAAAGGAGGACTTGAGCAACCTGAATGACCGTCTGGCGGTCTACATCGATAAGGTTCGCTCTCTGGAGGTGGAGAACGCAGGTCTGCGTATGCGCATCACTGAATCCGAGACGGAGATCAGCCGGGAGCTGAGTGGCATGAAAGCGGCGTACGAGGCTGAACTCGCAGATGCCAGGAAAACACTGGACTCGGTGGCCAAAGAACGAGCCAGACTGCAACTGGAGCTCAGCAAAGTGCGTGAGGACTACAAGGAGCTGAAGGCCAGGAACGGTAAGAAAGAAGCAGATCTGGAATCTGCTCTGGCCAGGCTGAAGGATCTGGAGTCTCTACTGAACTCCAAGGACGCGTCTCTCTCCACAGCTCTGGGGGAGAAGAGAACACTGGAGGTGGAAGTCAGAGATTTGAAAGCCCAGCTGGCCAAGTTGGAGGGCAGTCTAAACGATGCAAAGAAGCAGCTGCAGGATGAAATGCTGCGACGTGTGGATGCCGAAAACCGAATCCAGACACTGAAAGAGGAGCTGGAGTTCCAGAAGAACATCTACTCTGAGGAGCTCCGTGAGTCTAAGCGCAGATATGAGTCACGTGTGGTGGAGATTGACAGCGGCCGCCAGCAGGATTATGAGAGTAAACTGGCCGACGCTTTAACTGACCTCCGCAACCAACATGAAGAGCAGCTTCGCATCTACAAGGAAGAAATCGAGAAGACCTACAACTCCAAGctggAAAATGCTCGCTCTTCCGCTGAAAGGAACAGTCATCTGGTTGGAGCCGCCCATGAGGAACTGCAGCAAACACGTGTTAGGATGGAGGGTGTGAGTTCACAGCTCAGTCAGCTGCAGAAACAGTTGGCTGCTCGAGAGGCGAAGATCCGCGAGCTGGAAGAGGCCCTGTCCAGAGAGAGGGATATTTTGCGCCGTCGTCTGGAGGACAAGGAGAAGGAGATGGCTGAGATGAGACAGCGCATGCAGCAACAGCTGGACGAGTACCAGGAGCTGCTAGACATCAAACTCGCTCTGGACATGGAGATCAGTGCCTACAGGAAGCTTCTGGAGGGAGAGGAGGAAAGACTTCGTCTGTCTCCGAGTCCTCCTCCTGCTCGTGGGGTGACGGTGACCCGCTCCTCTGGTTCAGGCTCTCACACTCGTGTGGTTCAGAGCAGCACCAGTCGCACATCCTCCGGCAGCGCCAAGAAACGGCGCTTGAATGATAACGACAGTGATGCCTCCAGTGTGGTTGGAGGAACAGTGACCCGCACACGGATCTCCCAGCAAGCCTCAGCCAGCGGCCGCGTCACCGTTGACGAAGTCGACCTGGAAGGAAAATTTGTGCGGCTTAATAACAAGTCTGACCAGGATCAGTCTCTGGGTCACTGGCAGGTGAAGAGGCAGATTGGTTCTGGCACTCCCATCGTCTACAAGTTTCCACCCAAATTTAACCTGAAGGCAGGGCAGACTGTCACGATCTGGGCTGCAGGAGCCGGAGGCACCCACAGTCCTCCCAGTGACCTGGTGTGGAAGACCCAGAACTCATGGGGCAGCGGTGATTTGTTCCAGACCACCCTCATCAGCTCCAGCGGAGAGGAAATGGCGATGAGAAAAGTCACACGTACTCTGTTCCAGGATGAGGAAGATGATGAGATGGCGGCTCACAGCACATGCGGAGACAGCGAGTATAACCTGCGCAGCCGTACTGTGTTGTGCGGCTCGTGTGGTCAGCCGTCCGACAGGAACAGCAGTTGTGTTTCTGCCAGCTCAGGAGTGTCCAGCGCATCTCGCTCCTTCAgcagtggaggaggaggaggactcACTGAAGCTTTTGTGTCACCCTCTCACTTTATTGTGAGCAACGACAAACCCAGACaggctgGACCCAAAGTGGACAACTGCTCTATTATGTAGAGAGGCTGAAAACAAACCCTGACCATCTGTGCTTTCACAGAAACCAGGCGGAACTGATCCCAAAACTAGtttcttttcagtttttttatgtcTTATCATCACACTataacatatttgtacttcagtgTTTCTTGTTTCGTATTTCATAATCTACCGGCTAGATTTGGCTTTTTGTATGGCAGCTTGTAGGCAGTAGTTTGCGATTATTATGTAGAGTGTTACTCTAAAATATAAATGCATGGTGGCAGCAGCAGCTTCAGAATGATGGTCCTGCACTCAGGGAGAGAGGCAAACTGAGCACTTCACACTCACACCATGAGCTCTCAATGCTGTCAGAAAGCAACACGCACAGTCAACAAACCCTATCAGAAGCTCCAGTAAAGTGGACTACAGTTGTACAGCACATAGGCTAGTTATTTAGCTCATAAACACGGACAGTAAGATATAGTGAGTGTcgtttaaagagacagtacacctAAGAATGGACATTTGTTGAATTACTCATCCCAGGTCTTCCAAGATGTGACCTTTACTTCAGGAGAACTTTAAATAAGAGACATTTTTAGATATGAATTGTGATTGTTTGGTGATTTGTAAAATGCTGTTCATTTTAagagtaaaaaatatatacaggcaACACAAATTTAAATGCTGTAACTCCTAATAAACTGTAGAGAGGATTACATGTAAATAGTATTCAGTTTCAGTTTGCTCCATAagcagtgttgggtaaagttcttttaaagtaatatatCACAATCATAACTTGTAAAAATgccaaaataacaacacattcACTGAGTAACGTTTAGTTACTTAAAAAAGAGAGTTAAGATtacaatatattacttttaaaagtatatttaccCAACAATGTCCATAAAAACTCAATGTATCGTCAAGAGAAAATgtgtattaatttagttttacctGTATATGTTGTTTTATGACGCTCAAAGTTTTGTAGATGGTTGACCTGTGTTTTATAAATCACCAAGAATCACCTTTTGagctaaaatcttctttaatgacTTCTGAACACAGAGATTCACCTTCATCTCGCATGGCCTGCGGGTGAGtaaatataaaatcacatttCCATTTCATGGTGAACTCTACCTTTAATGGAAGACAGGAGAATGAGGGGTCATTTTACAATATGTCGCCTCAAACTTCTGTTATAGGAAGTTTTATGCTACCTCTCGCAGTCTGGTAGTCGAAAGGATGTGCACCTACAAAAGGGAAAAGAAAAGTGAGAATGTTTTGTGTTAAAGAGAGACTCGTGGATTAAATAAGTACAGATGCTTTGGAGACGGTTGAAACAGGTACTTGTGTTTTTTCTGTGCGTTTACAAGCTCTGACTAGACTGCAGTATGTCATGTCTTGTGTAATTAGTGTTATGGGATGTTTCTGAAAGACTTGAAGCAACTATAAAACGCATCCAAAGAAGTTCTCCTTAGCAGTTAGCATTTTTCAAGATGTTGTTGACATTTTACTCAATGGCTTGACTCATTGGTTTAAAAGCAAAACTGAAGTTTACTTGCAGAGAAAGATGTATTATGTTACCAGAGAAATCATGTTGAATTTAATatgatgtatttttgttttcagcCTTAGAGGCggaatatttaaatatgcaaaatgaCCACCGTCATTCCCTGTTTAAATTtgcatctaatttttttttttgttgtacggTGGTACTTTTGGTAAGTGTGCACGTAGACTAAAACGTTTGTGTTTCTCTATCTCTGTGTCTTTGAGTGTTGATTTGCTCCCGTCACTTCTGCTCTCTTGCAGTAGATCTAGTTCCTCATCTGGTCAGCTGTAAGCCTCTAGTAATTCTTCACTCACCTCCAGTCAGTTTAGAGGATCAAATACTAGACTTAATAAATGAGAAATCTAGAGCAGATTTGATCATAGGTGATTAAAAACATAAGCAGAGCTACAGCTCTCCAGAACGAGGACTGTATAATGCTGGCattaaacatgtattttattgCTTCGCAACGCTTTGGGTTTCTAAAGAAAAGTATTGGGATAGTATATctattttttctatatatatatacttatgaaTTGTGGTAATTTTGCTTACATAGCGTTTGACGTTATTGTAATAAGCCATGTATTTTGTTTTTCGTTTTTGAACTGATGATGtattttcagttgttttgttATGGCAAATTTCTGTTTGGCATCTTTGGCTTATGCAAAGAAACACTTACTGATAGCTGTTGGTGCATTTTATTAGCAAACTTCAAAGAAAAACATCTTTGTTTTCTTGATTTTGAGACTTGTTTTAGTTAGATGGCTAATGTCATGAaggttttgtaaaaaaataaaataaagagagtTCTGACTGCAGGGCAATGCAGGGAATGTTTAGTTGATTTTTTAtgattatgttttattgttttgtgaggaatttcacaaaaaatgtcaaatctgaGAGCCTTTGTTATGAACTGTGCCTTGATTTTGTTCAGTTAAATCAAATAAAGCCATTCTGACTTTTTTCCAGCTGGTCTccattaattaataaatctgtttttttatgtgaatctttggtttttatttaatgtttcacTCATgtcattttttgtgtttatttgttgaaatgcaattaatttcatatattttttcaaatttatttagtGATAATTAATTTTCAGTCACCAACATTGTTCACCATCTATTCTGAGCAGCCTAATCAATCTCTCAATatttctttcactttttttttctcttcccaCCGTAAATATATAAACCCATGTCTGAGGCCTTGGATTATTATAGAGTTTAGATACATTTgatatatgttataatatatgttttaatagtGAGAGGCAGGAGACAGACCAGCATTCATAAAAAGCATTTACAAACGAGCTgcaaaaatataaagtataattaatcaaatcaaattaaacatttaattatgtaaatatcACTTAAGTATTAAGTGAAAGGTCTTGATACATTTTCAGTGCTGGCATAAATAAGAGACGCTTCTgttgctt
>TCONS_00021098
GAACTATTTTGGCTGCTCTTCTGTGCCCAGCTATTTAGATTTAGAGTTAGCCGAAGCCTGCAGTCACTAGTAGCTACTGCTCTTTTGATTTGAGACACTCTTTAAAAAGTTGCTAAATGAAgccaaatgaatgttaaaaatagCTAAATTTGTTGCTGGGTGCTTTTAGGGAAACAAGCTAGGGTATTATGACAAGTTGCTAAAAAGTTAGCAACCAGGGTTTTACAGGGTTTTGTCAATCAGACTTTCAGTTAAATAGTcttgacctaatgtttcatgtagcCAAATGTCtatgtgctaaaaaaaataagaataagttAGCAAATCttaccttttgtttgttttgatcagAATCATGAGGATCTTTCACAGTCACTATAATGCTAAGAAAATAAGGCATATACATCAAGCTACTAAAATTTTCATTGCTATTCGTCAAGTTACTAAAtgggagcctgataaaaatgtgtgatttttttaataCTTCAGTCAAAATTCATTACCTGTGTATGTTTTTGTAGACCACGGTAAATTTCTGCGTTTCTATGTATCGGCCACTAGAGGACGCCGCACGATTCCATCATTCTGCTGCACTCACTGCTCTGCTAGTGTGCGGCGATGGTGGATCCATGACGCCTGCAAACAATTCCTGATTTTGGGCTTCGGCAACTtaTCAGTAGTTCCAGACAACCATGGAGACTCCAGGTCAGAAACGAAGCAGCCGCGGTGGGGTGACCAATGTCCTGTCCCCTACCCGCATCTCTCGATTGCAGGAAAAGGAGGACTTGAGCAACCTGAATGACCGTCTGGCGGTCTACATCGATAAGGTTCGCTCTCTGGAGGTGGAGAACGCAGGTCTGCGTATGCGCATCACTGAATCCGAGACGGAGATCAGCCGGGAGCTGAGTGGCATGAAAGCGGCGTACGAGGCTGAACTCGCAGATGCCAGGAAAACACTGGACTCGGTGGCCAAAGAACGAGCCAGACTGCAACTGGAGCTCAGCAAAGTGCGTGAGGACTACAAGGAGCTGAAGGCCAGGAACGGTAAGAAAGAAGCAGATCTGGAATCTGCTCTGGCCAGGCTGAAGGATCTGGAGTCTCTACTGAACTCCAAGGACGCGTCTCTCTCCACAGCTCTGGGGGAGAAGAGAACACTGGAGGTGGAAGTCAGAGATTTGAAAGCCCAGCTGGCCAAGTTGGAGGGCAGTCTAAACGATGCAAAGAAGCAGCTGCAGGATGAAATGCTGCGACGTGTGGATGCCGAAAACCGAATCCAGACACTGAAAGAGGAGCTGGAGTTCCAGAAGAACATCTACTCTGAGGAGCTCCGTGAGTCTAAGCGCAGATATGAGTCACGTGTGGTGGAGATTGACAGCGGCCGCCAGCAGGATTATGAGAGTAAACTGGCCGACGCTTTAACTGACCTCCGCAACCAACATGAAGAGCAGCTTCGCATCTACAAGGAAGAAATCGAGAAGACCTACAACTCCAAGctggAAAATGCTCGCTCTTCCGCTGAAAGGAACAGTCATCTGGTTGGAGCCGCCCATGAGGAACTGCAGCAAACACGTGTTAGGATGGAGGGTGTGAGTTCACAGCTCAGTCAGCTGCAGAAACAGTTGGCTGCTCGAGAGGCGAAGATCCGCGAGCTGGAAGAGGCCCTGTCCAGAGAGAGGGATATTTTGCGCCGTCGTCTGGAGGACAAGGAGAAGGAGATGGCTGAGATGAGACAGCGCATGCAGCAACAGCTGGACGAGTACCAGGAGCTGCTAGACATCAAACTCGCTCTGGACATGGAGATCAGTGCCTACAGGAAGCTTCTGGAGGGAGAGGAGGAAAGACTTCGTCTGTCTCCGAGTCCTCCTCCTGCTCGTGGGGTGACGGTGACCCGCTCCTCTGGTTCAGGCTCTCACACTCGTGTGGTTCAGAGCAGCACCAGTCGCACATCCTCCGGCAGCGCCAAGAAACGGCGCTTGAATGATAACGACAGTGATGCCTCCAGTGTGGTTGGAGGAACAGTGACCCGCACACGGATCTCCCAGCAAGCCTCAGCCAGCGGCCGCGTCACCGTTGACGAAGTCGACCTGGAAGGAAAATTTGTGCGGCTTAATAACAAGTCTGACCAGGATCAGTCTCTGGGTCACTGGCAGGTGAAGAGGCAGATTGGTTCTGGCACTCCCATCGTCTACAAGTTTCCACCCAAATTTAACCTGAAGGCAGGGCAGACTGTCACGATCTGGGCTGCAGGAGCCGGAGGCACCCACAGTCCTCCCAGTGACCTGGTGTGGAAGACCCAGAACTCATGGGGCAGCGGTGATTTGTTCCAGACCACCCTCATCAGCTCCAGCGGAGAGGAAATGGCGATGAGAAAAGTCACACGTACTCTGTTCCAGGATGAGGAAGATGATGAGATGGCGGCTCACAGCACATGCGGAGACAGCGAGTATAACCTGCGCAGCCGTACTGTGTTGTGCGGCTCGTGTGGTCAGCCGTCCGACAGGAACAGCAGTTGTGTTTCTGCCAGCTCAGGAGTGTCCAGCGCATCTCGCTCCTTCAgcagtggaggaggaggaggactcACTGAAGCTTTTGTGTCACCCTCTCACTTTATTGTGAGCAACGACAAACCCAGACaggtgtgtactgtatgtgtggagggcacttttgtttgtttgttaaatagcATTACATTGTGGTTGGTTTCTCtcttttttgaatgatttcagGCTCAAAGTTGTGCTCAAAatgtgcagtgctcagcatatttgagTACGCCCcactttaaaaaactgaatagtTTTATTCTTTTCTCAGAGAATatatgcaatatattttggtgcatttgaacaacagatttatcaaacatgtatttattaaaataatattttagtcacggTACATCTTtagaagtagaaaaaaaacacatttaaattcatgtgaagtattgcaaaaaaaaattactaacacacacacacacacacacacacacacagacacacacatatatatatatatgtttaatttgatttttgctattttttattttatattttcccccctaacatatacatttgggctacTATTTTTTAGACCATTAATTATTGTTGGATTAGATCTGGATTTGGCTTCTTCAGTACTGagtaatctaatgtttatgcataAATACCATATTGTGAATGatcttatagaaaatattaatgtaaaagagagatttgaAGGGGTATACTCTTATATGCTGAGCAGTGTATTTGCTATATGAATAGAGTTAGGATGAGGTTTGGGTCTAGGGTCAGTTGCATGTAATcatgcataattaattgtaaataCATAGGACATGTGTATtaaacaccttaaaataaagtgttaaaatactttatattattcattaattcattttcttttcgacttattccctttattattctgggttcgccacagcagaatgaaccgtcaacttgtccagcatatcttttacacagcggatgctcttccagctgcaacccatctctgagaaatacttgatattatgattttatattatttaatctaagactaaaataaattaaaaaaaaaaaaaaattaagttatagtttttttataattgtatttttttaagtataaattcatattttttatgttgaAGACTAAAATTGCCAAGGGGGAAAATCCTGtattgaaaaacaatttaaatgattttaataaagTTGCGAACAATTACAGTTTTTATGTGTAATTTATTGTTAACTCTTACTACTACTTATTCCGGGTTTCGGTATATGattttaatcttaaaatgatcaaattatCATTTAATGCTTTGTGAGGAATTAATTTATTGATATAaagttgtaattaaataaatatttgtaaaaaaaaaacaaaaaaaaacttgtggcaaaaacttaatacattttaaaattttctaAATTGACTGataaacatgtaaaaacaaatcaaagttatcaaaaaaaatcacatttcataaatacatgtacttgaagtcagaattattagccccctttgaattgtattattttttaaatatttccaaataatgtttcagagcaaggacatgttcacaatatgtctgataatattttttcttctgcaggaagtcttatttgttttatttcagcttgaatataaatttatagaaccatttcaaggtcaaaattattagccccctttaagctatattttttcaatagtctacagaacaaaccatcattatacaataacttgcctaagtacccttacctgcctagttaacctaattaacctagtttaagtctttaaatgtcaccttaagctgtatagaagtgtcttgaaacggggcaaataattcaataattctgacttcaactgtatgtatggacgtatgtatgcaagtatgtatgtatgtatgtgtgtatgcatatatatatatatataatgaggaATTTCAGTAATTAATTTAGTATTGCTATAAAACAGAAGCATGCTGTTAGAAAAGATTTGCAGGAGTCTTATTAAATTTACATTcatttcctttctctctctctctctctctcaggctgGACCCAAAGTGGACAACTGCTCTATTATGTAGAGAGGCTGAAAACAAACCCTGACCATCTGTGCTTTCACAGAAACCAGGCGGAACTGATCCCAAAACTAGtttcttttcagtttttttatgtcTTATCATCACACTataacatatttgtacttcagtgTTTCTTGTTTCGTATTTCATAATCTACCGGCTAGATTTGGCTTTTTGTATGGCAGCTTGTAGGCAGTAGTTTGCGATTATTATGTAGAGTGTTACTCTAAAATATAAATGCATGGTGGCAGCAGCAGCTTCAGAATGATGGTCCTGCACTCAGGGAGAGAGGCAAACTGAGCACTTCACACTCACACCATGAGCTCTCAATGCTGTCAGAAAGCAACACGCACAGTCAACAAACCCTATCAGAAGCTCCAGTAAAGTGGACTACAGTTGTACAGCACATAGGCTAGTTATTTAGCTCATAAACACGGACAGTAAGATATAGTGAGTGTcgtttaaagagacagtacacctAAGAATGGACATTTGTTGAATTACTCATCCCAGGTCTTCCAAGATGTGACCTTTACTTCAGGAGAACTTTAAATAAGAGACATTTTTAGATATGAATTGTGATTGTTTGGTGATTTGTAAAATGCTGTTCATTTTAagagtaaaaaatatatacaggcaACACAAATTTAAATGCTGTAACTCCTAATAAACTGTAGAGAGGATTACATGTAAATAGTATTCAGTTTCAGTTTGCTCCATAagcagtgttgggtaaagttcttttaaagtaatatatCACAATCATAACTTGTAAAAATgccaaaataacaacacattcACTGAGTAACGTTTAGTTACTTAAAAAAGAGAGTTAAGATtacaatatattacttttaaaagtatatttaccCAACAATGTCCATAAAAACTCAATGTATCGTCAAGAGAAAATgtgtattaatttagttttacctGTATATGTTGTTTTATGACGCTCAAAGTTTTGTAGATGGTTGACCTGTGTTTTATAAATCACCAAGAATCACCTTTTGagctaaaatcttctttaatgacTTCTGAACACAGAGATTCACCTTCATCTCGCATGGCCTGCGGGTGAGtaaatataaaatcacatttCCATTTCATGGTGAACTCTACCTTTAATGGAAGACAGGAGAATGAGGGGTCATTTTACAATATGTCGCCTCAAACTTCTGTTATAGGAAGTTTTATGCTACCTCTCGCAGTCTGGTAGTCGAAAGGATGTGCACCTACAAAAGGGAAAAGAAAAGTGAGAATGTTTTGTGTTAAAGAGAGACTCGTGGATTAAATAAGTACAGATGCTTTGGAGACGGTTGAAACAGGTACTTGTGTTTTTTCTGTGCGTTTACAAGCTCTGACTAGACTGCAGTATGTCATGTCTTGTGTAATTAGTGTTATGGGATGTTTCTGAAAGACTTGAAGCAACTATAAAACGCATCCAAAGAAGTTCTCCTTAGCAGTTAGCATTTTTCAAGATGTTGTTGACATTTTACTCAATGGCTTGACTCATTGGTTTAAAAGCAAAACTGAAGTTTACTTGCAGAGAAAGATGTATTATGTTACCAGAGAAATCATGTTGAATTTAATatgatgtatttttgttttcagcCTTAGAGGCggaatatttaaatatgcaaaatgaCCACCGTCATTCCCTGTTTAAATTtgcatctaatttttttttttgttgtacggTGGTACTTTTGGTAAGTGTGCACGTAGACTAAAACGTTTGTGTTTCTCTATCTCTGTGTCTTTGAGTGTTGATTTGCTCCCGTCACTTCTGCTCTCTTGCAGTAGATCTAGTTCCTCATCTGGTCAGCTGTAAGCCTCTAGTAATTCTTCACTCACCTCCAGTCAGTTTAGAGGATCAAATACTAGACTTAATAAATGAGAAATCTAGAGCAGATTTGATCATAGGTGATTAAAAACATAAGCAGAGCTACAGCTCTCCAGAACGAGGACTGTATAATGCTGGCattaaacatgtattttattgCTTCGCAACGCTTTGGGTTTCTAAAGAAAAGTATTGGGATAGTATATctattttttctatatatatatacttatgaaTTGTGGTAATTTTGCTTACATAGCGTTTGACGTTATTGTAATAAGCCATGTATTTTGTTTTTCGTTTTTGAACTGATGATGtattttcagttgttttgttATGGCAAATTTCTGTTTGGCATCTTTGGCTTATGCAAAGAAACACTTACTGATAGCTGTTGGTGCATTTTATTAGCAAACTTCAAAGAAAAACATCTTTGTTTTCTTGATTTTGAGACTTGTTTTAGTTAGATGGCTAATGTCATGAaggttttgtaaaaaaataaaataaagagagtTCTGACTGCAGGGCAATGCAGGGAATGTTTAGTTGATTTTTTAtgattatgttttattgttttgtgaggaatttcacaaaaaatgtcaaatctgaGAGCCTTTGTTATGAACTGTGCCTTGATTTTGTTCAGTTAAATCAAATAAAGCCATTCTGACTTTTTTCCAGCTGGTCTccattaattaataaatctgtttttttatgtgaatctttggtttttatttaatgtttcacTCATgtcattttttgtgtttatttgttgaaatgcaattaatttcatatattttttcaaatttatttagtGATAATTAATTTTCAGTCACCAACATTGTTCACCATCTATTCTGAGCAGCCTAATCAATCTCTCAATatttctttcactttttttttctcttcccaCCGTAAATATATAAACCCATGTCTGAGGCCTTGGATTATTATAGAGTTTAGATACATTTgatatatgttataatatatgttttaatagtGAGAGGCAGGAGACAGACCAGCATTCATAAAAAGCATTTACAAACGAGCTgcaaaaatataaagtataattaatcaaatcaaattaaacatttaattatgtaaatatcACTTAAGTATTAAGTGAAAGGTCTTGATACATTTTCAGTGCTGGCATAAATAAGAGACGCTTCTgttgctt
>TCONS_00021100
GCGAGTCGCAGCACACACTCTTTCAGCAGAGTTTCAGCGGGACACAGCAGCTGTAGGAGCTTCAATAACCCAAACTCTCTCTCTCAGCTTTACCAGtaTCAGTAGTTCCAGACAACCATGGAGACTCCAGGTCAGAAACGAAGCAGCCGCGGTGGGGTGACCAATGTCCTGTCCCCTACCCGCATCTCTCGATTGCAGGAAAAGGAGGACTTGAGCAACCTGAATGACCGTCTGGCGGTCTACATCGATAAGGTTCGCTCTCTGGAGGTGGAGAACGCAGGTCTGCGTATGCGCATCACTGAATCCGAGACGGAGATCAGCCGGGAGCTGAGTGGCATGAAAGCGGCGTACGAGGCTGAACTCGCAGATGCCAGGAAAACACTGGACTCGGTGGCCAAAGAACGAGCCAGACTGCAACTGGAGCTCAGCAAAGTGCGTGAGGACTACAAGGAGCTGAAGGCCAGGAACGGTAAGAAAGAAGCAGATCTGGAATCTGCTCTGGCCAGGCTGAAGGATCTGGAGTCTCTACTGAACTCCAAGGACGCGTCTCTCTCCACAGCTCTGGGGGAGAAGAGAACACTGGAGGTGGAAGTCAGAGATTTGAAAGCCCAGCTGGCCAAGTTGGAGGGCAGTCTAAACGATGCAAAGAAGCAGCTGCAGGATGAAATGCTGCGACGTGTGGATGCCGAAAACCGAATCCAGACACTGAAAGAGGAGCTGGAGTTCCAGAAGAACATCTACTCTGAGGAGCTCCGTGAGTCTAAGCGCAGATATGAGTCACGTGTGGTGGAGATTGACAGCGGCCGCCAGCAGGATTATGAGAGTAAACTGGCCGACGCTTTAACTGACCTCCGCAACCAACATGAAGAGCAGCTTCGCATCTACAAGGAAGAAATCGAGAAGACCTACAACTCCAAGctggAAAATGCTCGCTCTTCCGCTGAAAGGAACAGTCATCTGGTTGGAGCCGCCCATGAGGAACTGCAGCAAACACGTGTTAGGATGGAGGGTGTGAGTTCACAGCTCAGTCAGCTGCAGAAACAGTTGGCTGCTCGAGAGGCGAAGATCCGCGAGCTGGAAGAGGCCCTGTCCAGAGAGAGGGATATTTTGCGCCGTCGTCTGGAGGACAAGGAGAAGGAGATGGCTGAGATGAGACAGCGCATGCAGCAACAGCTGGACGAGTACCAGGAGCTGCTAGACATCAAACTCGCTCTGGACATGGAGATCAGTGCCTACAGGAAGCTTCTGGAGGGAGAGGAGGAAAGACTTCGTCTGTCTCCGAGTCCTCCTCCTGCTCGTGGGGTGACGGTGACCCGCTCCTCTGGTTCAGGCTCTCACACTCGTGTGGTTCAGAGCAGCACCAGTCGCACATCCTCCGGCAGCGCCAAGAAACGGCGCTTGAATGATAACGACAGTGATGCCTCCAGTGTGGTTGGAGGAACAGTGACCCGCACACGGATCTCCCAGCAAGCCTCAGCCAGCGGCCGCGTCACCGTTGACGAAGTCGACCTGGAAGGAAAATTTGTGCGGCTTAATAACAAGTCTGACCAGGATCAGTCTCTGGGTCACTGGCAGGTGAAGAGGCAGATTGGTTCTGGCACTCCCATCGTCTACAAGTTTCCACCCAAATTTAACCTGAAGGCAGGGCAGACTGTCACGATCTGGGCTGCAGGAGCCGGAGGCACCCACAGTCCTCCCAGTGACCTGGTGTGGAAGACCCAGAACTCATGGGGCAGCGGTGATTTGTTCCAGACCACCCTCATCAGCTCCAGCGGAGAGGAAATGGCGATGAGAAAAGTCACACGTACTCTGTTCCAGGATGAGGAAGATGATGAGATGGCGGCTCACAGCACATGCGGAGACAGCGAGTATAACCTGCGCAGCCGTACTGTGTTGTGCGGCTCGTGTGGTCAGCCGTCCGACAGGAACAGCAGTTGTGTTTCTGCCAGCTCAGGAGTGTCCAGCGCATCTCGCTCCTTCAgcagtggaggaggaggaggactcACTGAAGCTTTTGTGTCACCCTCTCACTTTATTGTGAGCAACGACAAACCCAGACaggctgGACCCAAAGTGGACAACTGCTCTATTATGTAGAGAGGCTGAAAACAAACCCTGACCATCTGTGCTTTCACAGAAACCAGGCGGAACTGATCCCAAAACTAGtttcttttcagtttttttatgtcTTATCATCACACTataacatatttgtacttcagtgTTTCTTGTTTCGTATTTCATAATCTACCGGCTAGATTTGGCTTTTTGTATGGCAGCTTGTAGGCAGTAGTTTGCGATTATTATGTAGAGTGTTACTCTAAAATATAAATGCATGGTGGCAGCAGCAGCTTCAGAATGATGGTCCTGCACTCAGGGAGAGAGGCAAACTGAGCACTTCACACTCACACCATGAGCTCTCAATGCTGTCAGAAAGCAACACGCACAGTCAACAAACCCTATCAGAAGCTCCAGTAAAGTGGACTACAGTTGTACAGCACATAGGCTAGTTATTTAGCTCATAAACACGGACAGTAAGATATAGTGAGTGTcgtttaaagagacagtacacctAAGAATGGACATTTGTTGAATTACTCATCCCAGGTCTTCCAAGATGTGACCTTTACTTCAGGAGAACTTTAAATAAGAGACATTTTTAGATATGAATTGTGATTGTTTGGTGATTTGTAAAATGCTGTTCATTTTAagagtaaaaaatatatacaggcaACACAAATTTAAATGCTGTAACTCCTAATAAACTGTAGAGAGGATTACATGTAAATAGTATTCAGTTTCAGTTTGCTCCATAagcagtgttgggtaaagttcttttaaagtaatatatCACAATCATAACTTGTAAAAATgccaaaataacaacacattcACTGAGTAACGTTTAGTTACTTAAAAAAGAGAGTTAAGATtacaatatattacttttaaaagtatatttaccCAACAATGTCCATAAAAACTCAATGTATCGTCAAGAGAAAATgtgtattaatttagttttacctGTATATGTTGTTTTATGACGCTCAAAGTTTTGTAGATGGTTGACCTGTGTTTTATAAATCACCAAGAATCACCTTTTGagctaaaatcttctttaatgacTTCTGAACACAGAGATTCACCTTCATCTCGCATGGCCTGCGGGTGAGtaaatataaaatcacatttCCATTTCATGGTGAACTCTACCTTTAATGGAAGACAGGAGAATGAGGGGTCATTTTACAATATGTCGCCTCAAACTTCTGTTATAGGAAGTTTTATGCTACCTCTCGCAGTCTGGTAGTCGAAAGGATGTGCACCTACAAAAGGGAAAAGAAAAGTGAGAATGTTTTGTGTTAAAGAGAGACTCGTGGATTAAATAAGTACAGATGCTTTGGAGACGGTTGAAACAGGTACTTGTGTTTTTTCTGTGCGTTTACAAGCTCTGACTAGACTGCAGTATGTCATGTCTTGTGTAATTAGTGTTATGGGATGTTTCTGAAAGACTTGAAGCAACTATAAAACGCATCCAAAGAAGTTCTCCTTAGCAGTTAGCATTTTTCAAGATGTTGTTGACATTTTACTCAATGGCTTGACTCATTGGTTTAAAAGCAAAACTGAAGTTTACTTGCAGAGAAAGATGTATTATGTTACCAGAGAAATCATGTTGAATTTAATatgatgtatttttgttttcagcCTTAGAGGCggaatatttaaatatgcaaaatgaCCACCGTCATTCCCTGTTTAAATTtgcatctaatttttttttttgttgtacggTGGTACTTTTGGTAAGTGTGCACGTAGACTAAAACGTTTGTGTTTCTCTATCTCTGTGTCTTTGAGTGTTGATTTGCTCCCGTCACTTCTGCTCTCTTGCAGTAGATCTAGTTCCTCATCTGGTCAGCTGTAAGCCTCTAGTAATTCTTCACTCACCTCCAGTCAGTTTAGAGGATCAAATACTAGACTTAATAAATGAGAAATCTAGAGCAGATTTGATCATAGGTGATTAAAAACATAAGCAGAGCTACAGCTCTCCAGAACGAGGACTGTATAATGCTGGCattaaacatgtattttattgCTTCGCAACGCTTTGGGTTTCTAAAGAAAAGTATTGGGATAGTATATctattttttctatatatatatacttatgaaTTGTGGTAATTTTGCTTACATAGCGTTTGACGTTATTGTAATAAGCCATGTATTTTGTTTTTCGTTTTTGAACTGATGATGtattttcagttgttttgttATGGCAAATTTCTGTTTGGCATCTTTGGCTTATGCAAAGAAACACTTACTGATAGCTGTTGGTGCATTTTATTAGCAAACTTCAAAGAAAAACATCTTTGTTTTCTTGATTTTGAGACTTGTTTTAGTTAGATGGCTAATGTCATGAaggttttgtaaaaaaataaaataaagagagtTCTGACTGCAGGGCAATGCAGGGAATGTTTAGTTGATTTTTTAtgattatgttttattgttttgtgaggaatttcacaaaaaatgtcaaatctgaGAGCCTTTGTTATGAACTGTGCCTTGATTTTGTTCAGTTAAATCAAATAAAGCCATTCTGACTTTTTTCCA
>TCONS_00021101
gtaTCAGTAGTTCCAGACAACCATGGAGACTCCAGGTCAGAAACGAAGCAGCCGCGGTGGGGTGACCAATGTCCTGTCCCCTACCCGCATCTCTCGATTGCAGGAAAAGGAGGACTTGAGCAACCTGAATGACCGTCTGGCGGTCTACATCGATAAGGTTCGCTCTCTGGAGGTGGAGAACGCAGGTCTGCGTATGCGCATCACTGAATCCGAGACGGAGATCAGCCGGGAGCTGAGTGGCATGAAAGCGGCGTACGAGGCTGAACTCGCAGATGCCAGGAAAACACTGGACTCGGTGGCCAAAGAACGAGCCAGACTGCAACTGGAGCTCAGCAAAGTGCGTGAGGACTACAAGGAGCTGAAGGCCAGGAACGGTAAGAAAGAAGCAGATCTGGAATCTGCTCTGGCCAGGCTGAAGGATCTGGAGTCTCTACTGAACTCCAAGGACGCGTCTCTCTCCACAGCTCTGGGGGAGAAGAGAACACTGGAGGTGGAAGTCAGAGATTTGAAAGCCCAGCTGGCCAAGTTGGAGGGCAGTCTAAACGATGCAAAGAAGCAGCTGCAGGATGAAATGCTGCGACGTGTGGATGCCGAAAACCGAATCCAGACACTGAAAGAGGAGCTGGAGTTCCAGAAGAACATCTACTCTGAGGAGCTCCGTGAGTCTAAGCGCAGATATGAGTCACGTGTGGTGGAGATTGACAGCGGCCGCCAGCAGGATTATGAGAGTAAACTGGCCGACGCTTTAACTGACCTCCGCAACCAACATGAAGAGCAGCTTCGCATCTACAAGGAAGAAATCGAGAAGACCTACAACTCCAAGctggAAAATGCTCGCTCTTCCGCTGAAAGGAACAGTCATCTGGTTGGAGCCGCCCATGAGGAACTGCAGCAAACACGTGTTAGGATGGAGGGTGTGAGTTCACAGCTCAGTCAGCTGCAGAAACAGTTGGCTGCTCGAGAGGCGAAGATCCGCGAGCTGGAAGAGGCCCTGTCCAGAGAGAGGGATATTTTGCGCCGTCGTCTGGAGGACAAGGAGAAGGAGATGGCTGAGATGAGACAGCGCATGCAGCAACAGCTGGACGAGTACCAGGAGCTGCTAGACATCAAACTCGCTCTGGACATGGAGATCAGTGCCTACAGGAAGCTTCTGGAGGGAGAGGAGGAAAGACTTCGTCTGTCTCCGAGTCCTCCTCCTGCTCGTGGGGTGACGGTGACCCGCTCCTCTGGTTCAGGCTCTCACACTCGTGTGGTTCAGAGCAGCACCAGTCGCACATCCTCCGGCAGCGCCAAGAAACGGCGCTTGAATGATAACGACAGTGATGCCTCCAGTGTGGTTGGAGGAACAGTGACCCGCACACGGATCTCCCAGCAAGCCTCAGCCAGCGGCCGCGTCACCGTTGACGAAGTCGACCTGGAAGGAAAATTTGTGCGGCTTAATAACAAGTCTGACCAGGATCAGTCTCTGGGTCACTGGCAGGTGAAGAGGCAGATTGGTTCTGGCACTCCCATCGTCTACAAGTTTCCACCCAAATTTAACCTGAAGGCAGGGCAGACTGTCACGATCTGGGCTGCAGGAGCCGGAGGCACCCACAGTCCTCCCAGTGACCTGGTGTGGAAGACCCAGAACTCATGGGGCAGCGGTGATTTGTTCCAGACCACCCTCATCAGCTCCAGCGGAGAGGAAATGGCGATGAGAAAAGTCACACGTACTCTGTTCCAGGATGAGGAAGATGATGAGATGGCGGCTCACAGCACATGCGGAGACAGCGAGTATAACCTGCGCAGCCGTACTGTGTTGTGCGGCTCGTGTGGTCAGCCGTCCGACAGGAACAGCAGTTGTGTTTCTGCCAGCTCAGGAGTGTCCAGCGCATCTCGCTCCTTCAgcagtggaggaggaggaggactcACTGAAGCTTTTGTGTCACCCTCTCACTTTATTGTGAGCAACGACAAACCCAGACaggctgGACCCAAAGTGGACAACTGCTCTATTATGTAGAGAGGCTGAAAACAAACCCTGACCATCTGTGCTTTCACAGAAACCAGGCGGAACTGATCCCAAAACTAGtttcttttcagtttttttatgtcTTATCATCACACTataacatatttgtacttcagtgTTTCTTGTTTCGTATTTCATAATCTACCGGCTAGATTT
>TCONS_00021102
GATCAGTCTCTGGGTCACTGGCAGGTGAAGAGGCAGATTGGTTCTGGCACTCCCATCGTCTACAAGTTTCCACCCAAATTTAACCTGAAGGCAGGGCAGACTGTCACGGTATGTATCGATTGAGGGAATGACAGTCACCCTTGGTTGGCATTTAAGTTCCTGACTTACTGTGGTGTCTGTGTGCTGTCAGATCTGGGCTGCAGGAGCCGGAGGCACCCACAGTCCTCCCAGTGACCTGGTGTGGAAGACCCAGAACTCATGGGGCAGCGGTGATTTGTTCCAGACCACCCTCATCAGCTCCAGCGGAGAGGAAATGGCGATGAGAAAAGTCACACGTACTCTGTTCCAGGATGAGGAAGATGATGAGATGGCGGCTCACAGCACATGCGGAGACAGCGAGTATAACCTGCGC
>TCONS_00021103
GTTTCAGCGGGACACAGCAGCTGTAGGAGCTTCAATAACCCAAACTCTCTCTCTCAGCTTTACCAGtaTCAGTAGTTCCAGACAACCATGGAGACTCCAGGTCAGAAACGAAGCAGCCGCGGTGGGGTGACCAATGTCCTGTCCCCTACCCGCATCTCTCGATTGCAGGAAAAGGAGGACTTGAGCAACCTGAATGACCGTCTGGCGGTCTACATCGATAAGGTTCGCTCTCTGGAGGTGGAGAACGCAGGTCTGCGTATGCGCATCACTGAATCCGAGACGGAGATCAGCCGGGAGCTGAGTGGCATGAAAGCGGCGTACGAGGCTGAACTCGCAGATGCCAGGAAAACACTGGACTCGGTGGCCAAAGAACGAGCCAGACTGCAACTGGAGCTCAGCAAAGTGCGTGAGGACTACAAGGAGCTGAAGGCCAGGGTTACAGTGGCCCTCGTGAGTTCCGGTGAGCATCAGTAACTCAGTTAATGCAGATGGACTTATTCACTCATTGAAGCTGAGCTGTTTGGCAGTGTTTGGTCTCCATGGTAACAGTGTGCTCTAGCCAGGGAGTGTGAGAGGATCTGACTGGACTGAGCGGTGACTCATGAGCTTTAAGTGACTATTGGGGGAAACACTGTTTACTCTCACTTTAACCCCTCACCTATTTAAGAAAATCTTTTTTCTTACTGAA

Function

symbol description
lmna Acts upstream of or within heart contraction and regulation of cell aging. Predicted to be located in intermediate filament. Is expressed in several structures, including fin; head; mesoderm; musculature system; and pleuroperitoneal region. Human ortholog(s) of this gene implicated in several diseases, including Charcot-Marie-Tooth disease type 2B1; intrinsic cardiomyopathy (multiple); lipodystrophy (multiple); muscular dystrophy (multiple); and type 2 diabetes mellitus (multiple). Orthologous to human LMNA (lamin A/C).

GO:

id name namespace
GO:0090342 regulation of cell aging biological_process
GO:0060047 heart contraction biological_process
GO:0005882 intermediate filament cellular_component

KEGG:

id description
ko04210 Apoptosis
ko05410 Hypertrophic cardiomyopathy
ko05412 Arrhythmogenic right ventricular cardiomyopathy
ko05414 Dilated cardiomyopathy
ko04812 Cytoskeleton proteins

ZFIN:

id description
ZDB-GENE-020424-3 Acts upstream of or within heart contraction and regulation of cell aging. Predicted to be located in intermediate filament. Is expressed in several structures, including fin; head; mesoderm; musculature system; and pleuroperitoneal region. Human ortholog(s) of this gene implicated in several diseases, including Charcot-Marie-Tooth disease type 2B1; intrinsic cardiomyopathy (multiple); lipodystrophy (multiple); muscular dystrophy (multiple); and type 2 diabetes mellitus (multiple). Orthologous to human LMNA (lamin A/C).

Ensembl:

ensembl_id ENSDARG00000013415

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00021099 False 5695 mRNA 0.42 13 30520357 30570161
TCONS_00021098 False 7611 mRNA 0.38 12 30520357 30570161
TCONS_00021100 False 4620 mRNA 0.44 13 30520857 30564319
TCONS_00021101 False 2167 mRNA 0.54 12 30523215 30563129
TCONS_00021102 False 412 lncRNA 0.54 3 30525512 30529738
TCONS_00021103 True 688 processed_transcript 0.52 3 30557709 30564289

Neighbor

gene id symbol gene type direction distance location
XLOC_010787 NA coding downstream 1118 30504516 ~ 30519239 (-)
XLOC_010786 pdia7 coding downstream 86078 30422481 ~ 30434279 (-)
XLOC_010785 cct3 coding downstream 99082 30408697 ~ 30421275 (-)
XLOC_010784 NA coding downstream 598587 29919595 ~ 29921770 (-)
XLOC_010783 tnfaip8l2b coding downstream 805817 29698565 ~ 29714540 (-)
XLOC_010789 mc5rb coding upstream 12828 30582989 ~ 30584279 (-)
XLOC_010790 ldlrad4b coding upstream 51523 30621684 ~ 30655980 (-)
XLOC_010791 BX005347.1 coding upstream 78226 30648387 ~ 30648504 (-)
XLOC_010792 ptk2ab coding upstream 165265 30735426 ~ 30870170 (-)
XLOC_010793 dennd3b coding upstream 301453 30871614 ~ 30885838 (-)
XLOC_010626 CR392024.2 misc downstream 9625182 20895112 ~ 20895175 (-)
XLOC_010781 NA non-coding downstream 869632 29647214 ~ 29650725 (-)
XLOC_010779 NA non-coding downstream 981404 29531348 ~ 29538953 (-)
XLOC_010777 BX248517.1 non-coding downstream 989995 29515971 ~ 29530362 (-)
XLOC_010798 NA non-coding upstream 596825 31166986 ~ 31169382 (-)
XLOC_010800 NA non-coding upstream 673619 31243780 ~ 31244681 (-)
XLOC_010802 NA non-coding upstream 814922 31385083 ~ 31407686 (-)
XLOC_010805 CR855311.2 non-coding upstream 938666 31508827 ~ 31511707 (-)

Expression


Co-expression Network