Fish Transcriptome and Expression Database

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economic fish

G294684

Basic Information

Item	Value
gene id	G294684
gene name	NA
gene type	non-coding
species	grasscarp (Ctenopharyngodon idella)
category of species	economic fish

Chromosome Information

Item	Value
chromosome id	CI01000082
NCBI id	null
chromosome length	5120761
location	96629 ~ 96844 (-)
genome version	v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU334569
GTGAAGTTAAAAATAAGTGATAGAACTGTCAACAGCTCAGTCTTACAGTGTGAAGCCTGGAGACCCAACTACGTTTTACAGACTCTTACTGACATGGACCCATTAAAACCACACATATACACATTTTCTAAACACTCCCTGCATATACTATATATTTATGAGTGAAAGCTCTTGCTGTTTGGCATACTTATCTGAAAATATATGCAGAATATATGC

Function

GO: NA

KEGG: NA

RNA

RNA id	representative	length	rna type	GC content	exon number	start site	end site
TU334569	True	216	lncRNA	0.36	1	96629	96844

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.

Neighbor

gene id	symbol	gene type	direction	distance	location
CI01000082_00127677_00131998	AND1	coding	upstream	30252	127096 ~ 131998 (-)
CI01000082_00135087_00136976	MYEOV2.S, MYEOV2, COPS9	coding	upstream	38124	134964 ~ 137769 (-)
CI01000082_00137937_00138124	NA	coding	upstream	40963	137461 ~ 138124 (-)
CI01000082_00139607_00140545	APODB	coding	upstream	42606	139450 ~ 140647 (-)
CI01000082_00159413_00161182	LRRC31	coding	upstream	62412	159256 ~ 161182 (-)
G294681	NA	non-coding	downstream	1820	93897 ~ 94809 (-)
G294669	NA	non-coding	downstream	56638	39754 ~ 39991 (-)
G294664	NA	non-coding	downstream	69663	25312 ~ 26966 (-)
G294660	NA	non-coding	downstream	77363	18947 ~ 19266 (-)
G294718	NA	non-coding	upstream	40617	138424 ~ 139202 (-)
G294737	NA	non-coding	upstream	314576	411420 ~ 411645 (-)
G294739	NA	non-coding	upstream	316694	413538 ~ 413770 (-)
G294715	NA	non-coding	upstream	317958	414802 ~ 416442 (-)
CI01000082_00597462_00611609	ZMYND11	other	upstream	509095	596319 ~ 611625 (-)
CI01000082_00678125_00678798	NA	other	upstream	543169	677628 ~ 678839 (-)
CI01000082_00666387_00667509	NA	other	upstream	569272	665937 ~ 667840 (-)
G294821	NA	other	upstream	573640	670484 ~ 671462 (-)
CI01000082_00689066_00690051	NA	other	upstream	592016	688512 ~ 690121 (-)

Expression

Co-expression Network