G294718


Basic Information

Item Value
gene id G294718
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000082
NCBI id null
chromosome length 5120761
location 138424 ~ 139202 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU334606
GAATGATGAATAAACCAACTTGATTTGAAATGCATCTCATAGACAGTCTTGAGGTGGTTTCCATGATGTAGATCTAGTTTGGGAGGGGACAAAACTTTCCTGAACTTGGGGTCCAGTCTGTCCAGAACCTGTGAAGCACAAAATCTTTTAGTTCTCAGAAACTGACGGATCTCATAATCAGTGCAGCAAAAGAGGGAAGGATGAAGTGGAGTGTGTTTTTTGGTGTTTTCTTGCTGTGTTTTCTCGCTAATCTCAGCAGTGCCAGATTCATTCCTGAAGGGGTACCCTATGAAAGGCCCCCGGCTATGCCCTACTGGTCATATTCCACCTCAGATTTCTGGAACTATGTGGAATACTTCCGCAACATTGGGGCTTATGACCAGATCAATGAAATGGCCAGAACATTCTTCGCCCATCAGCATCTGGGAGACACGCTGGGTTATGAAGTGGCAGAGCAGCATGAACACTAAGTCAATGTCATTAGTTTAGCAATCATAGTTTAGTTTGTGTCAGTAGAAACTATAGAGAATTACTGAAATATAACTAAAAACATTTATAGTCTTATAATGATGAAACTTGTGCCAAAGTACTACTAATAAAAAGGCATATAAAGGTCTCACTGTTAATGTTTCATTGTAGAGTGATTAACAGCTTCAGAGTGCATGATTGTGATCTATTATACGACCAGTTGTAAATATAGAAAAAGTAAGAAATAAACAAAAGTGTCATCCTGATGCACAGAAATTATTTTAATACCATCACTACAATAATCTGTGAGGACCAGTTCTCCAACCGAGCCAGTGGGACCCGTTTTCCAGCCGGTTACATTTTGACGTAACAACAACTGGTGATGTGAAGCCGCGAATCGATTCCTTCGAACAGTTCGTTGTAAAGAACCGGTTCGATGCTTTTTATCGCATTATGTGGTCCTTAGCGACTGGTGTGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU334606 True 282 lncRNA 0.41 3 138424 139202

Neighbor

gene id symbol gene type direction distance location
CI01000082_00127677_00131998 AND1 coding downstream 5463 127096 ~ 131998 (-)
CI01000082_00139607_00140545 APODB coding upstream 248 139450 ~ 140647 (-)
CI01000082_00159413_00161182 LRRC31 coding upstream 20054 159256 ~ 161182 (-)
CI01000082_00167971_00175044 NA coding upstream 27338 166540 ~ 175098 (-)
CI01000082_00179900_00182182 NA coding upstream 40671 179873 ~ 183490 (-)
CI01000082_00206805_00213203 SLC7A14, SLC7A14B coding upstream 67488 206690 ~ 213510 (-)
CI01000082_00135087_00136976 MYEOV2.S, MYEOV2, COPS9 non-coding downstream 433 134964 ~ 137769 (-)
G294684 NA non-coding downstream 40617 96629 ~ 96844 (-)
G294681 NA non-coding downstream 42652 93897 ~ 94809 (-)
G294669 NA non-coding downstream 97470 39754 ~ 39991 (-)
G294664 NA non-coding downstream 110495 25312 ~ 26966 (-)
G294737 NA non-coding upstream 272218 411420 ~ 411645 (-)
G294739 NA non-coding upstream 274336 413538 ~ 413770 (-)
G294715 NA non-coding upstream 275600 414802 ~ 416442 (-)
CI01000082_00445788_00458726 STAG1, STAG1A, STAG1B non-coding upstream 305616 444474 ~ 458726 (-)
G294792 NA non-coding upstream 414357 553559 ~ 568318 (-)
CI01000082_00597462_00611609 ZMYND11 other upstream 466737 596319 ~ 611625 (-)
CI01000082_00678125_00678798 NA other upstream 500811 677628 ~ 678839 (-)
CI01000082_00666387_00667509 NA other upstream 526914 665937 ~ 667840 (-)
G294821 NA other upstream 531282 670484 ~ 671462 (-)
CI01000082_00689066_00690051 NA other upstream 549658 688512 ~ 690121 (-)

Expression


Co-expression Network