Gene
RNA
| Item | Value |
|---|---|
| gene id | G295143 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000082 |
| NCBI id | null |
| chromosome length | 5120761 |
| location | 965538 ~ 965746 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| Transposable element Tcb1 transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU335104 | True | 209 | lncRNA | 0.43 | 1 | 965538 | 965746 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000082_00847325_00903986 | HS6ST1B, HS6ST1, HS6ST1A | coding | downstream | 61552 | 847325 ~ 903986 (-) |
| CI01000082_00692849_00695595 | NA | coding | downstream | 269903 | 692771 ~ 695766 (-) |
| CI01000082_00691711_00692356 | NA | coding | downstream | 273182 | 691643 ~ 692356 (-) |
| CI01000082_00689066_00690051 | NA | coding | downstream | 275431 | 688512 ~ 690121 (-) |
| CI01000082_00678125_00678798 | NA | coding | downstream | 286699 | 677628 ~ 678839 (-) |
| CI01000082_01040425_01063941 | NA | coding | upstream | 74494 | 1040240 ~ 1064660 (-) |
| CI01000082_01094334_01094888 | BCL2A | coding | upstream | 128588 | 1094334 ~ 1095207 (-) |
| CI01000082_01097596_01106806 | NA | coding | upstream | 131725 | 1097471 ~ 1106806 (-) |
| CI01000082_01113178_01153900 | PRKAG2A, PRKAG2 | coding | upstream | 147432 | 1113178 ~ 1153900 (-) |
| CI01000082_01164665_01166814 | NA | coding | upstream | 198728 | 1164474 ~ 1166814 (-) |
| G295116 | NA | non-coding | downstream | 54254 | 911073 ~ 911284 (-) |
| G294858 | NA | non-coding | downstream | 243317 | 721999 ~ 722221 (-) |
| G294853 | NA | non-coding | downstream | 252466 | 711791 ~ 713072 (-) |
| G294847 | NA | non-coding | downstream | 259793 | 705406 ~ 705745 (-) |
| G294844 | NA | non-coding | downstream | 265672 | 699642 ~ 699866 (-) |
| G295146 | NA | non-coding | upstream | 3858 | 969604 ~ 969842 (-) |
| G295163 | NA | non-coding | upstream | 223662 | 1189408 ~ 1190566 (-) |
| G295225 | NA | non-coding | upstream | 336000 | 1301746 ~ 1301947 (-) |
| G295229 | NA | non-coding | upstream | 344546 | 1310292 ~ 1310536 (-) |
| G295237 | NA | non-coding | upstream | 354755 | 1320501 ~ 1320732 (-) |
| G294821 | NA | other | downstream | 294076 | 670484 ~ 671462 (-) |
| CI01000082_00666387_00667509 | NA | other | downstream | 297698 | 665937 ~ 667840 (-) |
| CI01000082_00597462_00611609 | ZMYND11 | other | downstream | 353913 | 596319 ~ 611625 (-) |
| G296906 | NA | other | upstream | 1437073 | 2402819 ~ 2433912 (-) |
| CI01000082_02639529_02641582 | NA | other | upstream | 1672525 | 2638271 ~ 2641851 (-) |
| CI01000082_02829738_02840354 | NA | other | upstream | 1871456 | 2829738 ~ 2840354 (-) |
| CI01000082_03329243_03330818 | NA | other | upstream | 2363388 | 3329134 ~ 3332093 (-) |
| CI01000082_04002837_04008950 | BRAFLDRAFT_115150, CDK5 | other | upstream | 3041246 | 4001099 ~ 4009112 (-) |
