XLOC_010796 (gpr20)


Basic Information

Item Value
gene id XLOC_010796
gene name gpr20
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 30933249 ~ 30934319 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00021133
TCCTCCAGATCCAGCATCCAAACTACAGAGATGACCCATACCGAGGGTTCATCCAACCTCAACCTCACCTCAACCCTCGCCACTAACACCTCTCCACCAAACCGTGAGCCTTACCTCCACAGATTGGCCCACTTAGACGAGGGGCTCTATAATGACTTCTACAGCCTATGGATTGCTCTGGTGGTGATCAACACGCTCATCTTCATGGTCGGCATGACCCTCAACAGTCTGGCTTTGTACGTTTTCTGCTACAGAACCAAACCCAAAACCACATCGGTCATCTACACCATTAACCTGGTGGTGACGGATCTATTGGTCAACCTTTCGCTCCCTACTCGCATCGTACTCTACTACAGTGGAGGAAAATGCCTCAGTTGCTCTTACATGCACATATTCAGCTACTTTGTCAACATGTATTGTAGCATCCTCTTCCTCACCAGCATCTGCGTGGATCGCTACCTAGCCATCGTTCAATCTGAAGCATCGAGAAAATGGAGAAACCCCAATATAGCCAAAGCGGTTTGCGTTTGCATTTGGTTGTTCGCCATTGTTGTGACATATTCGCTTTTAACAACGGCGTTCAAGCAATCTGGTCTTTCGAAACTCTTTGCATTGACCATATTTGAGTTCTTCTTGCCAATGGTGATCATTGTAGCATTTACCATACGAATAGTGTGCGCTCTTTCCAGTCCAGGCCTTATGCAGCAGAGTCGCGACAGACGCATGAAGGCCATGCAGCTTCTGTCGACTGTTTTGGTGATCTTTACCATCTGCTTCACGCCGTTTCACGTCCGTCAGGTTCTCTTTTATTTCCACCCAGATCTTCCTCATCATGTGATTGTGTATCATGTCACTGTGACTCTCAGCAGCCTCAACAGCTGCTTGGATCCGGTGGTTTACTGTTTCGTCACTAGTAACTTTCAGTCGACTATGAAGAGGTTTTTCAGAAATAAGGAGAGAGAGCAGACGAGTGGAGACATTGCGAGCATCCAGAAAAGCTCCAAGGCTTCAGGGGCAGTGATTGCTTTGGATATTGGGAAAAGAATGAATATGAACAGCCGATCTGCATGA

Function

symbol description
gpr20 Predicted to enable G protein-coupled receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human GPR20 (G protein-coupled receptor 20).

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0007165 signal transduction biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG:

id description
ko04030 G protein-coupled receptors

ZFIN:

id description
ZDB-GENE-140106-136 Predicted to enable G protein-coupled receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human GPR20 (G protein-coupled receptor 20).

Ensembl:

ensembl_id ENSDARG00000077427

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00021133 True 1071 mRNA 0.47 1 30933249 30934319

Neighbor

gene id symbol gene type direction distance location
XLOC_010795 slc45a4b coding downstream 716 30905551 ~ 30932533 (-)
XLOC_010794 dennd3b coding downstream 29319 30893740 ~ 30903930 (-)
XLOC_010793 dennd3b coding downstream 47411 30871614 ~ 30885838 (-)
XLOC_010792 ptk2ab coding downstream 63079 30735426 ~ 30870170 (-)
XLOC_010790 ldlrad4b coding downstream 277269 30621684 ~ 30655980 (-)
XLOC_010797 dgat1b coding upstream 14132 30948451 ~ 31000727 (-)
XLOC_010798 NA coding upstream 232667 31166986 ~ 31169382 (-)
XLOC_010799 scrt1b coding upstream 251764 31186083 ~ 31188715 (-)
XLOC_010800 NA coding upstream 309461 31243780 ~ 31244681 (-)
XLOC_010801 mroh1 coding upstream 323964 31258283 ~ 31351419 (-)
XLOC_010626 CR392024.2 misc downstream 10038074 20895112 ~ 20895175 (-)
XLOC_010791 BX005347.1 non-coding downstream 284745 30648387 ~ 30648504 (-)
XLOC_010787 NA non-coding downstream 414010 30504516 ~ 30519239 (-)
XLOC_010784 NA non-coding downstream 1011479 29919595 ~ 29921770 (-)
XLOC_010781 NA non-coding downstream 1282524 29647214 ~ 29650725 (-)
XLOC_010779 NA non-coding downstream 1394296 29531348 ~ 29538953 (-)
XLOC_010802 NA non-coding upstream 450764 31385083 ~ 31407686 (-)
XLOC_010805 CR855311.2 non-coding upstream 574508 31508827 ~ 31511707 (-)
XLOC_010809 CR855311.1 non-coding upstream 689656 31623975 ~ 31628687 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000027_08701843_08702938 NA coding CI01000027 null 8700782 ~ 8702938 (-)