G295163


Basic Information

Item Value
gene id G295163
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000082
NCBI id null
chromosome length 5120761
location 1189408 ~ 1190566 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU335125
CAATAAGGAGAGCTCGTTGCTGCCCGCGGCGTCGTAATCGTACAGCACTCGCGCTTTACGGCTCCCGCTGAAGTTTTGAAGCTCGGTGAAACCTGAAGACACACTGCCTTTGGTGGAAGGAAGAGGGGCTGATAGTGGCAGGATGGGTACGGAGACACTGGCACCGCCGCTGGCCGTTGACTGGTTGTTGTTGGAAGAGAAAGCCGAAGGGAAGCCAACTGCTTTTGGAGGTCGACCATGTACTGGTAACACTGGGCGTAATACGTCATCTGAGCCTCCACAAAGTCATTTAGACAGCGGAGATGATGGGCCTGAGAGAGAGAAGGTTGGGAGAGAGATAATATGGTTTGTTATAGGTCAGACGTTGAGTAAAACCGAGGGGTTGTGAGATGTGGATTGGCAGGCGGCCCAGTGGGCGGCAGGTTTTTAGACAAGAGCTCACATGTGTACTGCTGATTCCTTCCAGAAGAAGCCTGGTGATTTCTGCCTGTCTGTCAAACTCACTCTGTGTCATCTTCAGATCCTGCTCGGCCTGAAAGAGAGAGAAATAGAAATAGGAATGTTTCACTTACACAGCTTAAATTTGGCATGAAACGGAAGTTGTGATAATCTTTTCTTCCCTATTGTGACACATATCCGTGTGAAACGGCTTCTCGAACAAGAAAAAAAAAAAATGTAGGACGGGACTTGATTTTGTCCAATGGGAAATCTTGGATCATTGTGGTTTGCTATTGCTGTGATCTCATGTGAGTGACAGGTTGTACCTCCCTCACGCCAAAAAAAAATGTAAACAGAAAACAGAAGAGATGTCGCTGCAAGAGGGAGGGAGGTTATTTTTAAATGAAAGATTATGAGGGTACATGGATTTTAAAAAATAATGATGTGCACAGATAATCCATTTATAATAAATACTGCAATATTCCATAAAAGATAAGAATTGTCAAATGTAATTTCAAGCTGACTTAAATCAAATGTGGATGATATAAGATTCATCACAATCACATTATTCAAAGGGAACAAAGCTGAAAATATAGCCAGTGCGTTTTCATATATAGATATTGTTGACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU335125 True 1067 lncRNA 0.43 2 1189408 1190566

Neighbor

gene id symbol gene type direction distance location
CI01000082_01164665_01166814 NA coding downstream 22594 1164474 ~ 1166814 (-)
CI01000082_01113178_01153900 PRKAG2A, PRKAG2 coding downstream 35508 1113178 ~ 1153900 (-)
CI01000082_01097596_01106806 NA coding downstream 82602 1097471 ~ 1106806 (-)
CI01000082_01094334_01094888 BCL2A coding downstream 94201 1094334 ~ 1095207 (-)
CI01000082_01040425_01063941 NA coding downstream 124748 1040240 ~ 1064660 (-)
CI01000082_01199588_01202126 NRROS coding upstream 8856 1199422 ~ 1203642 (-)
CI01000082_01211221_01216257 FBXO45 coding upstream 19970 1210536 ~ 1216493 (-)
CI01000082_01230554_01235723 NA coding upstream 38948 1229514 ~ 1235739 (-)
CI01000082_01300876_01305478 TECRL2A coding upstream 110001 1300567 ~ 1305478 (-)
CI01000082_01330784_01334768 OLFM3, OLFM3A coding upstream 139687 1330253 ~ 1335190 (-)
G295146 NA non-coding downstream 219566 969604 ~ 969842 (-)
G295143 NA non-coding downstream 223662 965538 ~ 965746 (-)
G295116 NA non-coding downstream 278124 911073 ~ 911284 (-)
G294858 NA non-coding downstream 467187 721999 ~ 722221 (-)
G294853 NA non-coding downstream 476336 711791 ~ 713072 (-)
G295225 NA non-coding upstream 111180 1301746 ~ 1301947 (-)
G295229 NA non-coding upstream 119726 1310292 ~ 1310536 (-)
G295237 NA non-coding upstream 129935 1320501 ~ 1320732 (-)
G295243 NA non-coding upstream 156393 1346959 ~ 1347268 (-)
G295261 NA non-coding upstream 222054 1412620 ~ 1413188 (-)
CI01000082_00689066_00690051 NA other downstream 498974 688512 ~ 690121 (-)
CI01000082_00678125_00678798 NA other downstream 507102 677628 ~ 678839 (-)
G294821 NA other downstream 517946 670484 ~ 671462 (-)
CI01000082_00666387_00667509 NA other downstream 521568 665937 ~ 667840 (-)
CI01000082_00597462_00611609 ZMYND11 other downstream 577783 596319 ~ 611625 (-)
G296906 NA other upstream 1212253 2402819 ~ 2433912 (-)
CI01000082_02639529_02641582 NA other upstream 1447705 2638271 ~ 2641851 (-)
CI01000082_02829738_02840354 NA other upstream 1646636 2829738 ~ 2840354 (-)
CI01000082_03329243_03330818 NA other upstream 2138568 3329134 ~ 3332093 (-)
CI01000082_04002837_04008950 BRAFLDRAFT_115150, CDK5 other upstream 2816426 4001099 ~ 4009112 (-)

Expression


Co-expression Network