Gene
RNA
| Item | Value |
|---|---|
| gene id | G295323 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000082 |
| NCBI id | null |
| chromosome length | 5120761 |
| location | 1468868 ~ 1469127 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU335295 | True | 260 | lncRNA | 0.36 | 1 | 1468868 | 1469127 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000082_01372750_01454491 | COL11A1 | coding | downstream | 12348 | 1372398 ~ 1456520 (-) |
| CI01000082_01330784_01334768 | OLFM3, OLFM3A | coding | downstream | 133678 | 1330253 ~ 1335190 (-) |
| CI01000082_01300876_01305478 | TECRL2A | coding | downstream | 163390 | 1300567 ~ 1305478 (-) |
| CI01000082_01230554_01235723 | NA | coding | downstream | 233129 | 1229514 ~ 1235739 (-) |
| CI01000082_01211221_01216257 | FBXO45 | coding | downstream | 252375 | 1210536 ~ 1216493 (-) |
| CI01000082_01490700_01492559 | NA | coding | upstream | 21525 | 1490652 ~ 1492559 (-) |
| CI01000082_01680942_01689756 | NA | coding | upstream | 211664 | 1680791 ~ 1690021 (-) |
| CI01000082_01796282_01837217 | VAV3 | coding | upstream | 327109 | 1796236 ~ 1837547 (-) |
| CI01000082_01851564_01866686 | NA | coding | upstream | 382400 | 1851527 ~ 1867273 (-) |
| CI01000082_01885169_01923048 | NA | coding | upstream | 415194 | 1884321 ~ 1925600 (-) |
| G295274 | NA | non-coding | downstream | 8960 | 1459695 ~ 1459908 (-) |
| G295261 | NA | non-coding | downstream | 55680 | 1412620 ~ 1413188 (-) |
| G295243 | NA | non-coding | downstream | 121600 | 1346959 ~ 1347268 (-) |
| G295237 | NA | non-coding | downstream | 148136 | 1320501 ~ 1320732 (-) |
| G295229 | NA | non-coding | downstream | 158332 | 1310292 ~ 1310536 (-) |
| G295314 | NA | non-coding | upstream | 10764 | 1479891 ~ 1481422 (-) |
| G295334 | NA | non-coding | upstream | 25819 | 1494946 ~ 1495319 (-) |
| G295383 | NA | non-coding | upstream | 128435 | 1597562 ~ 1597776 (-) |
| G296673 | NA | non-coding | upstream | 206368 | 1675495 ~ 1675782 (-) |
| CI01000082_00689066_00690051 | NA | other | downstream | 778434 | 688512 ~ 690121 (-) |
| CI01000082_00678125_00678798 | NA | other | downstream | 786562 | 677628 ~ 678839 (-) |
| G294821 | NA | other | downstream | 797406 | 670484 ~ 671462 (-) |
| CI01000082_00666387_00667509 | NA | other | downstream | 801028 | 665937 ~ 667840 (-) |
| CI01000082_00597462_00611609 | ZMYND11 | other | downstream | 857243 | 596319 ~ 611625 (-) |
| G296906 | NA | other | upstream | 933692 | 2402819 ~ 2433912 (-) |
| CI01000082_02639529_02641582 | NA | other | upstream | 1169144 | 2638271 ~ 2641851 (-) |
| CI01000082_02829738_02840354 | NA | other | upstream | 1368075 | 2829738 ~ 2840354 (-) |
| CI01000082_03329243_03330818 | NA | other | upstream | 1860007 | 3329134 ~ 3332093 (-) |
| CI01000082_04002837_04008950 | BRAFLDRAFT_115150, CDK5 | other | upstream | 2537865 | 4001099 ~ 4009112 (-) |
