G296824


Basic Information

Item Value
gene id G296824
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000082
NCBI id null
chromosome length 5120761
location 2233790 ~ 2234533 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU336976
CAAAAGTGACATTGAAGACATTTATAATGTTACAAAAGATTTCTATTTCAAATAAATGCTGTTCTTTTGAACTGTATATTCATCAAAAAGTCCTGAAAAAAATGTATTGAGCAGCACAACTGATTTCAACATTGATAATAATAAGAAATGTTTCTTGAGCATCAAATCAGCATATTAGAATGATTTCTGAAGGATCATGTGACACTGAAGACTGGAGTAATGATGCTGAAAATTCAGCTTTGCATCACAGGAAGATATTACATTTTAAAATATATTAAAATAGAAAACAGTTTTTTAAAATTGTAACAGCATTGCACAATATTACTCATTTTACTGTATTTTTGAACAAATAAATGCAGCCTTTGTGAGCATAAGAGACTTTAAGAGACATTTGAAAAAATCTTACCGACCACAAACTTTTGAAAGGAAGTAAATTTACTTGCGAGTCAAAATTGTCTTGGATTAAGTTTTTTTTTGCATCTGCCTATCTATATATCCATCCATCCATCTGTCCGTCTATCTATCTATACATCCATCTATCATCCATCCATCCATCCATCTATATATCTGTCTGTCCATCTGTCCATCCATCCGCCCGTCCATTCGTCCATCCATTCATCCATTCATCCACAATTAAAAAAAAAAGAAGCTATTTGTCAAAGTAAAAATATCAAACACAATACTGCATCAAGTACATTTTTCTGGTTTTAAGGATATGTTAAGATACTTTTACTATAAAGCAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU336976 True 744 lncRNA 0.31 1 2233790 2234533

Neighbor

gene id symbol gene type direction distance location
CI01000082_02175270_02187098 SNX7 coding downstream 45624 2175227 ~ 2188166 (-)
CI01000082_02172392_02173323 NA coding downstream 60208 2172378 ~ 2173582 (-)
CI01000082_02065074_02095249 PLPPR4, LPPR4 coding downstream 138515 2064261 ~ 2095275 (-)
CI01000082_01976234_01986067 SYNC, NARS coding downstream 247723 1975811 ~ 1986067 (-)
CI01000082_01945468_01947837 NA coding downstream 285953 1943661 ~ 1947837 (-)
CI01000082_02295379_02298949 NA coding upstream 60609 2295142 ~ 2299324 (-)
CI01000082_02449770_02454344 NA coding upstream 215210 2449743 ~ 2455546 (-)
CI01000082_02499101_02514104 PTBP2, PTBP2A coding upstream 264073 2498606 ~ 2514104 (-)
CI01000082_02639529_02641582 NA coding upstream 404534 2638271 ~ 2641851 (-)
CI01000082_02648283_02668024 TMEM56, TMEM56A coding upstream 412255 2646788 ~ 2668024 (-)
G296820 NA non-coding downstream 2592 2226775 ~ 2231198 (-)
G296775 NA non-coding downstream 138837 2094722 ~ 2094953 (-)
G296773 NA non-coding downstream 139732 2093784 ~ 2094058 (-)
G296763 NA non-coding downstream 175655 2057726 ~ 2058135 (-)
G296742 NA non-coding downstream 191552 2038376 ~ 2042238 (-)
G296934 NA non-coding upstream 231966 2466499 ~ 2466891 (-)
G296937 NA non-coding upstream 243457 2477990 ~ 2478222 (-)
G296939 NA non-coding upstream 245378 2479911 ~ 2480129 (-)
G296943 NA non-coding upstream 250058 2484591 ~ 2484794 (-)
G296958 NA non-coding upstream 251959 2486492 ~ 2486718 (-)
CI01000082_00689066_00690051 NA other downstream 1543356 688512 ~ 690121 (-)
CI01000082_00678125_00678798 NA other downstream 1551484 677628 ~ 678839 (-)
G294821 NA other downstream 1562328 670484 ~ 671462 (-)
CI01000082_00666387_00667509 NA other downstream 1565950 665937 ~ 667840 (-)
CI01000082_00597462_00611609 ZMYND11 other downstream 1622165 596319 ~ 611625 (-)
G296906 NA other upstream 168286 2402819 ~ 2433912 (-)
CI01000082_02829738_02840354 NA other upstream 602669 2829738 ~ 2840354 (-)
CI01000082_03329243_03330818 NA other upstream 1094601 3329134 ~ 3332093 (-)
CI01000082_04002837_04008950 BRAFLDRAFT_115150, CDK5 other upstream 1772459 4001099 ~ 4009112 (-)

Expression


Co-expression Network