Gene
RNA
| Item | Value |
|---|---|
| gene id | G297017 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000082 |
| NCBI id | null |
| chromosome length | 5120761 |
| location | 2644846 ~ 2645182 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| extensin-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU337187 | True | 337 | lncRNA | 0.36 | 1 | 2644846 | 2645182 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000082_02639529_02641582 | NA | coding | downstream | 3264 | 2638271 ~ 2641851 (-) |
| CI01000082_02499101_02514104 | PTBP2, PTBP2A | coding | downstream | 130742 | 2498606 ~ 2514104 (-) |
| CI01000082_02449770_02454344 | NA | coding | downstream | 189300 | 2449743 ~ 2455546 (-) |
| CI01000082_02295379_02298949 | NA | coding | downstream | 345522 | 2295142 ~ 2299324 (-) |
| CI01000082_02175270_02187098 | SNX7 | coding | downstream | 456680 | 2175227 ~ 2188166 (-) |
| CI01000082_02648283_02668024 | TMEM56, TMEM56A | coding | upstream | 1606 | 2646788 ~ 2668024 (-) |
| CI01000082_02686245_02689228 | CNN3B, CNN3A, CNN3 | coding | upstream | 40194 | 2685376 ~ 2689228 (-) |
| CI01000082_02716435_02737089 | NA | coding | upstream | 70883 | 2716065 ~ 2737473 (-) |
| CI01000082_02750513_02759616 | ACP5B | coding | upstream | 105298 | 2750480 ~ 2761296 (-) |
| CI01000082_02762419_02777589 | ABCD3, ABCD3A | coding | upstream | 116798 | 2761980 ~ 2778096 (-) |
| G296982 | NA | non-coding | downstream | 109775 | 2534850 ~ 2535071 (-) |
| G296974 | NA | non-coding | downstream | 114959 | 2529433 ~ 2529887 (-) |
| G296967 | NA | non-coding | downstream | 151201 | 2493387 ~ 2493645 (-) |
| G296966 | NA | non-coding | downstream | 152694 | 2491950 ~ 2492152 (-) |
| G296965 | NA | non-coding | downstream | 153446 | 2491165 ~ 2491400 (-) |
| G296951 | NA | non-coding | upstream | 98434 | 2743616 ~ 2747930 (-) |
| G297043 | NA | non-coding | upstream | 116251 | 2761433 ~ 2761646 (-) |
| G297051 | NA | non-coding | upstream | 156111 | 2801293 ~ 2807804 (-) |
| G297047 | NA | non-coding | upstream | 168887 | 2814069 ~ 2815014 (-) |
| G297055 | NA | non-coding | upstream | 179235 | 2824417 ~ 2824694 (-) |
| G296906 | NA | other | downstream | 210934 | 2402819 ~ 2433912 (-) |
| CI01000082_00689066_00690051 | NA | other | downstream | 1954412 | 688512 ~ 690121 (-) |
| CI01000082_00678125_00678798 | NA | other | downstream | 1962540 | 677628 ~ 678839 (-) |
| CI01000082_02829738_02840354 | NA | other | upstream | 192020 | 2829738 ~ 2840354 (-) |
| CI01000082_03329243_03330818 | NA | other | upstream | 683952 | 3329134 ~ 3332093 (-) |
| CI01000082_04002837_04008950 | BRAFLDRAFT_115150, CDK5 | other | upstream | 1361810 | 4001099 ~ 4009112 (-) |
| CI01000082_04332255_04333022 | NA | other | upstream | 1675328 | 4330173 ~ 4334359 (-) |
| CI01000082_04698358_04700580 | NA | other | upstream | 2053020 | 4697533 ~ 4700580 (-) |
