Gene
RNA
| Item | Value |
|---|---|
| gene id | G297055 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000082 |
| NCBI id | null |
| chromosome length | 5120761 |
| location | 2824417 ~ 2824694 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU337229 | True | 278 | lncRNA | 0.26 | 1 | 2824417 | 2824694 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000082_02762419_02777589 | ABCD3, ABCD3A | coding | downstream | 46321 | 2761980 ~ 2778096 (-) |
| CI01000082_02750513_02759616 | ACP5B | coding | downstream | 63121 | 2750480 ~ 2761296 (-) |
| CI01000082_02716435_02737089 | NA | coding | downstream | 86944 | 2716065 ~ 2737473 (-) |
| CI01000082_02686245_02689228 | CNN3B, CNN3A, CNN3 | coding | downstream | 135189 | 2685376 ~ 2689228 (-) |
| CI01000082_02648283_02668024 | TMEM56, TMEM56A | coding | downstream | 156393 | 2646788 ~ 2668024 (-) |
| CI01000082_02829738_02840354 | NA | coding | upstream | 5044 | 2829738 ~ 2840354 (-) |
| CI01000082_02927016_02952280 | NA | coding | upstream | 101878 | 2926572 ~ 2952666 (-) |
| CI01000082_02962536_02962848 | MMP16 | coding | upstream | 137794 | 2962488 ~ 2962848 (-) |
| CI01000082_03069619_03074440 | STEAP2 | coding | upstream | 243613 | 3068307 ~ 3074871 (-) |
| CI01000082_03101028_03103698 | NA | coding | upstream | 276209 | 3100903 ~ 3103921 (-) |
| G297047 | NA | non-coding | downstream | 9403 | 2814069 ~ 2815014 (-) |
| G297051 | NA | non-coding | downstream | 16613 | 2801293 ~ 2807804 (-) |
| G297043 | NA | non-coding | downstream | 62771 | 2761433 ~ 2761646 (-) |
| G296951 | NA | non-coding | downstream | 76487 | 2743616 ~ 2747930 (-) |
| G297017 | NA | non-coding | downstream | 179235 | 2644846 ~ 2645182 (-) |
| G297058 | NA | non-coding | upstream | 90882 | 2915576 ~ 2922022 (-) |
| G297100 | NA | non-coding | upstream | 173556 | 2998250 ~ 3003174 (-) |
| CI01000082_03136108_03172662 | RSU1, RSU1.S | non-coding | upstream | 347749 | 3135166 ~ 3172887 (-) |
| G297170 | NA | non-coding | upstream | 408019 | 3232713 ~ 3235633 (-) |
| G297206 | NA | non-coding | upstream | 428679 | 3253373 ~ 3253721 (-) |
| CI01000082_02639529_02641582 | NA | other | downstream | 182566 | 2638271 ~ 2641851 (-) |
| G296906 | NA | other | downstream | 390505 | 2402819 ~ 2433912 (-) |
| CI01000082_00689066_00690051 | NA | other | downstream | 2133983 | 688512 ~ 690121 (-) |
| G294821 | NA | other | downstream | 2152955 | 670484 ~ 671462 (-) |
| CI01000082_00666387_00667509 | NA | other | downstream | 2156577 | 665937 ~ 667840 (-) |
| CI01000082_03329243_03330818 | NA | other | upstream | 504440 | 3329134 ~ 3332093 (-) |
| CI01000082_04002837_04008950 | BRAFLDRAFT_115150, CDK5 | other | upstream | 1182298 | 4001099 ~ 4009112 (-) |
| CI01000082_04332255_04333022 | NA | other | upstream | 1495816 | 4330173 ~ 4334359 (-) |
| CI01000082_04698358_04700580 | NA | other | upstream | 1873508 | 4697533 ~ 4700580 (-) |
