Gene
RNA
| Item | Value |
|---|---|
| gene id | G297100 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000082 |
| NCBI id | null |
| chromosome length | 5120761 |
| location | 2998250 ~ 3003174 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU337285 | True | 317 | lncRNA | 0.47 | 3 | 2998250 | 3003174 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000082_02962536_02962848 | MMP16 | coding | downstream | 35402 | 2962488 ~ 2962848 (-) |
| CI01000082_02927016_02952280 | NA | coding | downstream | 45584 | 2926572 ~ 2952666 (-) |
| CI01000082_02829738_02840354 | NA | coding | downstream | 157896 | 2829738 ~ 2840354 (-) |
| CI01000082_02819813_02826440 | NA | coding | downstream | 171810 | 2818780 ~ 2826440 (-) |
| CI01000082_02762419_02777589 | ABCD3, ABCD3A | coding | downstream | 220154 | 2761980 ~ 2778096 (-) |
| CI01000082_03069619_03074440 | STEAP2 | coding | upstream | 65133 | 3068307 ~ 3074871 (-) |
| CI01000082_03101028_03103698 | NA | coding | upstream | 97729 | 3100903 ~ 3103921 (-) |
| CI01000082_03127420_03132170 | C1QL3, C1QL3A, C1QL3B | coding | upstream | 124033 | 3127207 ~ 3132170 (-) |
| CI01000082_03136108_03172662 | RSU1, RSU1.S | coding | upstream | 131992 | 3135166 ~ 3172887 (-) |
| CI01000082_03175106_03183324 | CUBN | coding | upstream | 171743 | 3174917 ~ 3183324 (-) |
| G297058 | NA | non-coding | downstream | 76228 | 2915576 ~ 2922022 (-) |
| G297055 | NA | non-coding | downstream | 173556 | 2824417 ~ 2824694 (-) |
| G297047 | NA | non-coding | downstream | 183236 | 2814069 ~ 2815014 (-) |
| G297051 | NA | non-coding | downstream | 190446 | 2801293 ~ 2807804 (-) |
| G297043 | NA | non-coding | downstream | 236604 | 2761433 ~ 2761646 (-) |
| G297170 | NA | non-coding | upstream | 229539 | 3232713 ~ 3235633 (-) |
| G297206 | NA | non-coding | upstream | 250199 | 3253373 ~ 3253721 (-) |
| G297243 | NA | non-coding | upstream | 301042 | 3304216 ~ 3307917 (-) |
| G297298 | NA | non-coding | upstream | 465782 | 3468956 ~ 3470374 (-) |
| CI01000082_02639529_02641582 | NA | other | downstream | 356399 | 2638271 ~ 2641851 (-) |
| G296906 | NA | other | downstream | 564338 | 2402819 ~ 2433912 (-) |
| CI01000082_00689066_00690051 | NA | other | downstream | 2307816 | 688512 ~ 690121 (-) |
| G294821 | NA | other | downstream | 2326788 | 670484 ~ 671462 (-) |
| CI01000082_03329243_03330818 | NA | other | upstream | 325960 | 3329134 ~ 3332093 (-) |
| CI01000082_04002837_04008950 | BRAFLDRAFT_115150, CDK5 | other | upstream | 1003818 | 4001099 ~ 4009112 (-) |
| CI01000082_04332255_04333022 | NA | other | upstream | 1317336 | 4330173 ~ 4334359 (-) |
| CI01000082_04698358_04700580 | NA | other | upstream | 1695028 | 4697533 ~ 4700580 (-) |
