G297170


Basic Information

Item Value
gene id G297170
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000082
NCBI id null
chromosome length 5120761
location 3232713 ~ 3235633 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU337360
GTGGAAATTTGTTGATAGTTTGGTCTTCTTATGGTGAAAGAGAGACAAAATCATCAAGTTTTTGGTCATTTGCAATAATTATACAAAACAGAAAAAGCTCAATCAGTATTGCTGTGGTCTTCAACAGTGTAAACTACAGACATTGTGGTAAACATAAACCTGGTTAAAGCTGGTTTACTCAGTGGCCTACGTTGTCTTTTCAGCTCTAATACAGCTCTATAAACAGACCGCTCTAATGTGGCAATGCAAAAAAGGCACTTTAAAGCTGTTTTTCTTTTTTACTCTCAACAGAAACAACAAAAGAAACTTCATTCTCCTTCTTGTTCTACTTCAGCGTGGATCTTCAGCTCTCTAGTGCCCCTACTGGTCACAGGTACACATGCAGTTCATTCCAGATCATCCTGGTTTTGGGTGGACTCGTTAATTATCTGCAATGATTGAAAAGTCAAAGGGTCATCATTTTCATATAAAAACTTAATATCTTATATTTAAACTCTTTTCATGCCACTCACATGTCCATCTCTGGTCTCAATGGTCTTTATCACCACCTTCTTTGACAGGTTGTCTATCACAGGTCTGGTTTCCTTCATGGTCTCTCGCAGGGATAATGATTTGAAATTGGGAAATGGTGTGGTGATCCTGCTTTCTTCCCCTTCCAGCAGCTTCCTGTAGGTGGCGATCTCAATATCCAGGGCCATTTTAACATTCAGCAGATCCTGGTATTCACGTAGATGACGTGCCATCTCCTCCTTCATGTTACGGATATCGTCCTCTAGACGGCCGATGGTGTCCTGGTAACCGTGTGCCTCCATGGAAAAGTTTTCTTCCATCTCTCTCATCTGACGCTCCATGGACTCATTCTGAAATTATGGATTCAATAATTTGTCATTTAAGCAGCCATAATATAAAGCACTTTAATAAATGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU337360 True 926 lncRNA 0.40 3 3232713 3235633

Neighbor

gene id symbol gene type direction distance location
CI01000082_03217934_03225669 TRDMT1 coding downstream 7044 3217877 ~ 3225669 (-)
CI01000082_03216898_03217396 NA coding downstream 14982 3215507 ~ 3217731 (-)
CI01000082_03210506_03213453 CUBN coding downstream 19260 3210506 ~ 3213453 (-)
CI01000082_03207155_03210294 CUBN coding downstream 22419 3207155 ~ 3210294 (-)
CI01000082_03200775_03204839 CUBN coding downstream 27874 3200218 ~ 3204839 (-)
CI01000082_03290868_03295427 NA coding upstream 54681 3290314 ~ 3296154 (-)
CI01000082_03329243_03330818 NA coding upstream 93517 3329134 ~ 3332093 (-)
CI01000082_03340985_03351365 CCDC129 coding upstream 105046 3340679 ~ 3351365 (-)
CI01000082_03399450_03399994 EIF1B, EIF1 coding upstream 163539 3399172 ~ 3399994 (-)
CI01000082_03420930_03425791 PTCHD3A coding upstream 184708 3420341 ~ 3425890 (-)
CI01000082_03136108_03172662 RSU1, RSU1.S non-coding downstream 59843 3135166 ~ 3172887 (-)
G297100 NA non-coding downstream 229539 2998250 ~ 3003174 (-)
G297058 NA non-coding downstream 310691 2915576 ~ 2922022 (-)
G297055 NA non-coding downstream 408019 2824417 ~ 2824694 (-)
G297047 NA non-coding downstream 417699 2814069 ~ 2815014 (-)
G297206 NA non-coding upstream 17740 3253373 ~ 3253721 (-)
G297243 NA non-coding upstream 68583 3304216 ~ 3307917 (-)
G297298 NA non-coding upstream 233323 3468956 ~ 3470374 (-)
G297315 NA non-coding upstream 311345 3546978 ~ 3547720 (-)
G297289 NA non-coding upstream 336288 3571921 ~ 3576845 (-)
CI01000082_02829738_02840354 NA other downstream 393746 2829738 ~ 2840354 (-)
CI01000082_02639529_02641582 NA other downstream 590862 2638271 ~ 2641851 (-)
G296906 NA other downstream 798801 2402819 ~ 2433912 (-)
CI01000082_00689066_00690051 NA other downstream 2542279 688512 ~ 690121 (-)
G294821 NA other downstream 2561251 670484 ~ 671462 (-)
CI01000082_04002837_04008950 BRAFLDRAFT_115150, CDK5 other upstream 771359 4001099 ~ 4009112 (-)
CI01000082_04332255_04333022 NA other upstream 1084877 4330173 ~ 4334359 (-)
CI01000082_04698358_04700580 NA other upstream 1462569 4697533 ~ 4700580 (-)

Expression


Co-expression Network