CI01000086_00515623_00516606



Basic Information


Item Value
gene id CI01000086_00515623_00516606
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000086
NCBI id null
chromosome length 2920448
location 515623 ~ 516856 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000086_00515623_00516606.mRNA
ATGGTGTGGACAGTGGGTCTCAGTAACCTGGTGTTAGCGGTCTACGGATTCACGCTGATCATAGGCCTTCCCGCCAATATCTTGGCTTTTTACACCTTCTTCCAGAAGATCCGCCAGCAATCTACCCCAATGGACATGCTGTTACTCAGTTTAACAGTCTCTGACCTGATTTTGTTCTTTTTCCTGCCAATTCGCATGGTGGAGGAGGCCAACATGAAAAGGACGATGCCGTACTTCCTCTGCCTGCTGTCAGTTTTCATCTTCTACTCTGTCATCGGCAACAGCAGCTTGCACCTGATGGCCATCAGTGTGGAGCGATACTTGGGTGTAGCTTTCCCAATTAAATACAAGCTGAAACGCAACCCTCGAAATGCTGTGATAGCCTGCGTCATGTTCTGGGTGGTTTCCATGGCACACGGCAGCATTGTCTACATCATCCAATACCACGATCATTTGAACCCCAACATCACCGATCCATCAAAGCGTAACACCTGTCATGAAGAATTCACCACCGAGCAGCTCAAGATTCTCCTGCCGTTTCACCTAGAACTTTCTATTGTTTTCTTCTGCATTCCTTTCCTCATCTGCTGCTTCTGCTACATCAAGTGCATCTGCATACTTTTCCGTCTATCCAAAGTTCACTCCAAGAAGCGATATAGAGCCACCGGGATGGCGTTGGGAACGCTTCTGGTCTTTGTTATCACTTTTATGCCCAACAGCATCTCATATGTGGAGGGATATGTTGGCGGCTACAGTACTAAATGGAAAAAATATGCTCTGCTCACCAGCACGCTGAATGCATGTCTCAACCCTCTCATATTCTATTTCTCTTCTTCAGCACTCAGAGAGACTTTCAAGAAGGTGTTGCAGGAGCTGGTGGGGCGGCTCCTCCCTCTCTGCTGCCGCTCGGCTCCATGCTGCCCTTTATTTAACCGTGGGAAATCAGAGGAGAGAACACAAAGCTCTGATGACAGATTCCTCTAACATACCAAGCCAGGTTTTGCTTTGATTGATGTGCTTTGCATTGCCTGCATATGCATCTTCAATGCATGCCATTCTGTCCAAAGCCAATTCATGTCATTCTATTACGCCACCATAACCCAATGCTTAATGGATGGACAGAAGAGGAACAGCTTAAAAATGGTTTTTGGAAGAGAAAATCAAGCATGCACATGATGATTGCACTAATATTTTTCTTAAATCTTTGCATCAGCATAATTTTATACACAATGAA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000086_00515623_00516606.mRNA True 1234 mRNA 0.46 1 515623 516856

Neighbor


gene id symbol gene type direction distance location
CI01000086_00499939_00501377 NA coding upstream 13524 498625 ~ 502116 (+)
CI01000086_00368462_00375640 RAB5AA, RAB5A.L, RAB5A, RAB5AB coding upstream 139547 366994 ~ 376076 (+)
CI01000086_00347031_00351599 NA coding upstream 162913 344994 ~ 352710 (+)
CI01000086_00013752_00066354 PLCL2 coding upstream 449269 13752 ~ 66354 (+)
CI01000086_00000438_00009357 NA coding upstream 506131 438 ~ 9492 (+)
CI01000086_00528152_00537757 NR1D2 coding downstream 11218 528074 ~ 538752 (+)
CI01000086_00569583_00570500 NA coding downstream 52675 569531 ~ 570500 (+)
CI01000086_00598327_00599803 NA coding downstream 81471 598327 ~ 599895 (+)
CI01000086_00603554_00613149 USF2 coding downstream 86698 603554 ~ 613470 (+)
CI01000086_00629905_00632087 NA coding downstream 112909 629765 ~ 632433 (+)
G298106 NA non-coding upstream 122366 392988 ~ 393257 (+)
G298105 NA non-coding upstream 123368 392012 ~ 392255 (+)
G298104 NA non-coding upstream 124767 390581 ~ 390856 (+)
G298096 NA non-coding upstream 149859 365531 ~ 365764 (+)
G298071 NA non-coding upstream 158577 356731 ~ 357046 (+)
G298198 NA non-coding downstream 56536 573392 ~ 578643 (+)
G298220 NA non-coding downstream 135410 652266 ~ 721985 (+)
G298219 NA non-coding downstream 183719 700575 ~ 753258 (+)
G298230 NA non-coding downstream 190682 707538 ~ 710093 (+)
G298208 NA other downstream 430335 947191 ~ 980110 (+)
G298366 NA other downstream 619804 1136660 ~ 1147867 (+)
CI01000086_01150842_01165271 DHDDS other downstream 645918 1150842 ~ 1165922 (+)
G298381 NA other downstream 655300 1172156 ~ 1176916 (+)
G298529 NA other downstream 1360034 1876890 ~ 1881453 (+)

Expression



Co-expression Network