CI01000086_00569583_00570500


Basic Information

Item Value
gene id CI01000086_00569583_00570500
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000086
NCBI id null
chromosome length 2920448
location 569531 ~ 570500 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000086_00569583_00570500.mRNA
TGATAAATGTCAGTCTCATTTTGCTATTTTCCAGAGTTCTTTCACATGCAAAATGGTAAACCACTTGGTCATTTTAGCCGTCTACGTTGTGACGTTTCTAATCGGCCTGCCAGCCAATCTACTGGCCATATGCACCTTCATTAAGAAACTCGGTGACAAACCCAATCCGAATGACATCCTGCTCTTCAACCTGACGGCTTCCGACTTGGTCTTCCTGCTCTTTCTGCCCTTCAAGATGTATGAAGCTGCCGTTGGTATGAAATGGTACATATCCCAGACCCTGTGCTCAATCGCCTCCTTCTTCTTTTTCACCACGATTTACACCAGCTCCCTGTTGCTCATGGCTATAGCCGTGGATCGCTACTTAGGACTGGCTTTTCCGATCAAATACAGACTGTTGCGCAAGCCGCTTTACGCTGCGGTAGGCAGCGTCATCATCTGGCTGGCCAGTATCAGCCATTGCAGCATCGTATTCATCATTGTCCATATGCCATTGCCGAACGGCACCAAAACCGAACCTGTCTGCTATGAGCATTTCACCGAGAAGCAAAAGAAGATCTTGTTACCAGTCCGTCTTGAATTTTTTGTGGTTATTTACATACTACCACTTTTAGTTTCTATCTTCTGCTATATTAACTGCATCTACATCCTGTACAGCAGGCCTCAAATAGCCAAAGTGAAAAAGCAAAGGGCCATTGGCATGGCATTGTGCACGCTGACCATCTTTTTACTCTGTTTTCTGCCCTACAACATGTCCCACCTGGTGGGATTCAGCAGCAACGAAAGCCCGTGGTGGAGGTACTACACGCTCCTGCCCAGCACGCTCAACACCTGCCTGGATCCGTTCGTCTTCTACTTCTCCTCCTCCACTTTCCGTAAAAGCAAAACCATTGCTTTACTCAAGACCTGCTGTTTTAGACATAAGAAAACTAAAAAGTGTGAAGTTGAACTGAAGATAATATCAAAATGA

Function

NR:

description
unnamed protein product, partial

GO:

id name namespace
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000086_00569583_00570500.mRNA True 970 mRNA 0.46 1 569531 570500

Neighbor

gene id symbol gene type direction distance location
CI01000086_00528152_00537757 NR1D2 coding upstream 30779 528074 ~ 538752 (+)
CI01000086_00515623_00516606 NA coding upstream 52675 515623 ~ 516856 (+)
CI01000086_00499939_00501377 NA coding upstream 67432 498625 ~ 502116 (+)
CI01000086_00368462_00375640 RAB5AA, RAB5A.L, RAB5A, RAB5AB coding upstream 193455 366994 ~ 376076 (+)
CI01000086_00347031_00351599 NA coding upstream 216821 344994 ~ 352710 (+)
CI01000086_00598327_00599803 NA coding downstream 27827 598327 ~ 599895 (+)
CI01000086_00603554_00613149 USF2 coding downstream 33054 603554 ~ 613470 (+)
CI01000086_00629905_00632087 NA coding downstream 59265 629765 ~ 632433 (+)
CI01000086_00702140_00704803 NA coding downstream 131576 702076 ~ 705733 (+)
CI01000086_00877464_00899432 IGLON5 coding downstream 306964 877464 ~ 899492 (+)
G298106 NA non-coding upstream 176274 392988 ~ 393257 (+)
G298105 NA non-coding upstream 177276 392012 ~ 392255 (+)
G298104 NA non-coding upstream 178675 390581 ~ 390856 (+)
G298096 NA non-coding upstream 203767 365531 ~ 365764 (+)
G298071 NA non-coding upstream 212485 356731 ~ 357046 (+)
G298198 NA non-coding downstream 2892 573392 ~ 578643 (+)
G298220 NA non-coding downstream 81766 652266 ~ 721985 (+)
G298219 NA non-coding downstream 130075 700575 ~ 753258 (+)
G298230 NA non-coding downstream 137038 707538 ~ 710093 (+)
G298208 NA other downstream 376691 947191 ~ 980110 (+)
G298366 NA other downstream 566160 1136660 ~ 1147867 (+)
CI01000086_01150842_01165271 DHDDS other downstream 592274 1150842 ~ 1165922 (+)
G298381 NA other downstream 601656 1172156 ~ 1176916 (+)
G298529 NA other downstream 1306390 1876890 ~ 1881453 (+)

Expression


Co-expression Network