CI01000086_01030611_01038651


Basic Information

Item Value
gene id CI01000086_01030611_01038651
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000086
NCBI id null
chromosome length 2920448
location 1030271 ~ 1038748 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000086_01030611_01038651.mRNA
CAATAAAAGCTTTTAAATCATACAACTAACGTCAATTGACGTTTATCGTGGGCGTGGTTTTGATTGATCTATGTCTCGCTCTTACCTACGGACAGGAGGACAGTAGTTTTCCTAAAAACTCATTTCGTCTCTGGTAATCAGTGCAATACGATCTCAGTACAACAGAAAGGCAGTGAACACGGAGTTTAAGCTTCGAAAGTCAAGGTAAGATTGTTTATTTAGACCTGATGGCCAACGAGTCAGTCTCACCTGAATGAAACAGACTTTGAGGGAAGGAGCTATTCAGGGAAAAAAGAAAGGCAGAAATAATTCCAGTCCCTCTAATGATTTTTCAGGTGTCATGGGATCTTGGATGCTGGTTTGGATTCTGTGTACCACCACAGTCATTCTGAAGGAACCTCCAAAAGCGTCGATTGCACTTGTGCTGGAGTGTGTGGTGGATAAGCATGACATGGCGCAGTGGGACAGCCCTCAGTTTTCATGGCTGGTTGATGGAGTTGCAGTAACCAATCAAACCGCACTGTTAGGAGGTGGCAGTAGACTCGATATCTCTCAGGTTAAGGGAGTTAACTATACCTGCGTCATCAAGAGCAGCCTGGGGACACGGTTCACAACACATTATGAAGAAGAACCAAAAGGTATTGTTCAATGTCAAGAACGTATGGCATTTATCTTTATGGAATCTAGGAATCCCTGTTGTTCAGGACTGATTGCACTTGCAGTTGCAGTAGCACTGTGTGTGGCCGGGTGTCATGGAGTCATGGATACTGCTTTGGATTCTGTGTACCACAGTCACTCTGAGTGAGTCTGGTGTTACTGGGTAAA

Function

NR:

description
hypothetical protein cypCar_00039770

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000086_01030611_01038651.mRNA False 825 mRNA 0.44 4 1030271 1038671

Neighbor

gene id symbol gene type direction distance location
CI01000086_00877464_00899432 IGLON5 coding upstream 130779 877464 ~ 899492 (+)
CI01000086_00702140_00704803 NA coding upstream 324538 702076 ~ 705733 (+)
CI01000086_00629905_00632087 NA coding upstream 397861 629765 ~ 632433 (+)
CI01000086_00603554_00613149 USF2 coding upstream 416801 603554 ~ 613470 (+)
CI01000086_00598327_00599803 NA coding upstream 430376 598327 ~ 599895 (+)
CI01000086_01044588_01047516 NA coding downstream 5798 1044469 ~ 1047601 (+)
CI01000086_01053732_01056868 NA coding downstream 14686 1053357 ~ 1057119 (+)
CI01000086_01098078_01098642 NA coding downstream 59264 1097935 ~ 1098805 (+)
CI01000086_01150842_01165271 DHDDS coding downstream 112171 1150842 ~ 1165922 (+)
CI01000086_01265644_01273085 NA coding downstream 226693 1265364 ~ 1273446 (+)
G298290 NA non-coding upstream 83932 946098 ~ 946339 (+)
G298164 NA non-coding upstream 124417 495230 ~ 905854 (+)
G298280 NA non-coding upstream 136155 893327 ~ 894116 (+)
G298279 NA non-coding upstream 154245 875681 ~ 876026 (+)
G298266 NA non-coding upstream 209224 818668 ~ 821047 (+)
G298207 NA non-coding downstream 22811 1061482 ~ 1115384 (+)
G298363 NA non-coding downstream 84429 1123100 ~ 1126798 (+)
G298366 NA non-coding downstream 99776 1136660 ~ 1147867 (+)
G298377 NA non-coding downstream 106609 1145280 ~ 1145556 (+)
G298382 NA non-coding downstream 140492 1179163 ~ 1184457 (+)
G298208 NA other upstream 50161 947191 ~ 980110 (+)
CI01000086_00499939_00501377 NA other upstream 528155 498625 ~ 502116 (+)
G298381 NA other downstream 133485 1172156 ~ 1176916 (+)
G298529 NA other downstream 838219 1876890 ~ 1881453 (+)
CI01000086_02807666_02845401 PHLDB3, ETHE1 other downstream 1768912 2806368 ~ 2845762 (+)

Expression


Co-expression Network