CI01000086_01044588_01047516


Basic Information

Item Value
gene id CI01000086_01044588_01047516
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000086
NCBI id null
chromosome length 2920448
location 1044469 ~ 1047601 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000086_01044588_01047516.mRNA
TTATAAGAGGTGAGTCCAGTAAAAACACTCATAAAGTTCCAGACTCCGCCTGTAATGCGTCTGACTTTCGGGCTTAATGTTCTGCACGAGCAGCTGATTCTCTCCTCCATGCAGGCGACATGGACCCACGACTACAGCCGTTCACTCGGACCCTCCTGCTTTTACACGTCTGCTGGCTCTGGAGTGTCCAGTGTTTGTCCGTCCGCTTCACAAACCAGCAGTCTGTGTATGTGATCAAAGGCCAGAATCTGATCCTGCAGGCTCAGATTGAGCTGCTGAAGGGTGAACATGTGGCTAAAGTGACATGGGACCACAGTGCAGAGACTTCTGGGAAGAGTTCAACAGTGGCTGAGTTTCCTCATACAATCTCTGATGGGAGAGTGACTGTGGAGCAGCAGGGAGCCATGCTGAAGATCAGGGATTATCAGGCAGCGGACGGCGGCGTTTATACTGTCACAGTTACTGACCAATCAGGACAGAGACACTCTGCACAGCAAACTGTTCAGGAGTATCGTAAGATCAACTAAAGCCTTCAATTCATTCACATGCACTCTGCTGATACTCCTCAAACGCTCTGTTGTTCTTCTTCTCCACCTAATTCTGCCTGAACCA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000086_01044588_01047516.mRNA True 612 mRNA 0.50 2 1044469 1047601

Neighbor

gene id symbol gene type direction distance location
CI01000086_01030611_01038651 NA coding upstream 5798 1030271 ~ 1038748 (+)
CI01000086_00877464_00899432 IGLON5 coding upstream 144977 877464 ~ 899492 (+)
CI01000086_00702140_00704803 NA coding upstream 338736 702076 ~ 705733 (+)
CI01000086_00629905_00632087 NA coding upstream 412059 629765 ~ 632433 (+)
CI01000086_00603554_00613149 USF2 coding upstream 430999 603554 ~ 613470 (+)
CI01000086_01053732_01056868 NA coding downstream 5756 1053357 ~ 1057119 (+)
CI01000086_01098078_01098642 NA coding downstream 50334 1097935 ~ 1098805 (+)
CI01000086_01150842_01165271 DHDDS coding downstream 103241 1150842 ~ 1165922 (+)
CI01000086_01265644_01273085 NA coding downstream 217763 1265364 ~ 1273446 (+)
CI01000086_01371003_01393249 SLC9A1 coding downstream 323402 1371003 ~ 1393807 (+)
G298290 NA non-coding upstream 98130 946098 ~ 946339 (+)
G298280 NA non-coding upstream 150353 893327 ~ 894116 (+)
G298279 NA non-coding upstream 168443 875681 ~ 876026 (+)
G298266 NA non-coding upstream 223422 818668 ~ 821047 (+)
G298207 NA non-coding downstream 13881 1061482 ~ 1115384 (+)
G298363 NA non-coding downstream 75499 1123100 ~ 1126798 (+)
G298366 NA non-coding downstream 90846 1136660 ~ 1147867 (+)
G298377 NA non-coding downstream 97679 1145280 ~ 1145556 (+)
G298382 NA non-coding downstream 131562 1179163 ~ 1184457 (+)
G298208 NA other upstream 64359 947191 ~ 980110 (+)
CI01000086_00499939_00501377 NA other upstream 542353 498625 ~ 502116 (+)
G298381 NA other downstream 124555 1172156 ~ 1176916 (+)
G298529 NA other downstream 829289 1876890 ~ 1881453 (+)
CI01000086_02807666_02845401 PHLDB3, ETHE1 other downstream 1759982 2806368 ~ 2845762 (+)

Expression


Co-expression Network