CI01000086_01069219_01094068 (AGO3, EIF2C3, I2C3)


Basic Information

Item Value
gene id CI01000086_01069219_01094068
gene name AGO3, EIF2C3, I2C3
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000086
NCBI id null
chromosome length 2920448
location 1061523 ~ 1094251 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

Function

symbol description
ago3 Enables RNA binding activity and endoribonuclease activity, cleaving miRNA-paired mRNA. Involved in RNA metabolic process; gene silencing by miRNA; and regulation of stem cell proliferation. Located in cytoplasmic ribonucleoprotein granule; cytosol; and nucleoplasm. Part of RISC complex and RISC-loading complex.

GO:      GO:0035068, GO:1901224, GO:0003674, GO:0031054, GO:0035280, GO:0005737, GO:0090625, GO:0016020, GO:0003725, GO:0006402, GO:0010501, GO:0070578, GO:0044822, GO:0008150, GO:0000794, GO:0035279, GO:0035278, GO:0048015, GO:0007223, GO:0035198, GO:0035194, GO:0035196, GO:0000932, GO:0072091, GO:0005575, GO:0003727, GO:0010628, GO:0003723, GO:0005515, GO:0016442, GO:0005829

KEGG:

id description
K11593 ELF2C, AGO; eukaryotic translation initiation factor 2C

RNA

RNA id representative length rna type GC content exon number start site end site

Neighbor

gene id symbol gene type direction distance location
CI01000086_01005334_01006342 NA coding downstream 62665 1004584 ~ 1006342 (-)
CI01000086_00978789_00999074 NA coding downstream 69267 978540 ~ 999740 (-)
CI01000086_00949574_00963179 NA coding downstream 105747 948026 ~ 963260 (-)
CI01000086_00935341_00936321 NA coding downstream 129819 935052 ~ 939188 (-)
CI01000086_00587995_00596565 BRAFLDRAFT_115002, ETFB, ETFB.L coding downstream 472268 587765 ~ 596739 (-)
CI01000086_01101333_01138683 NA coding upstream 6509 1100760 ~ 1138683 (-)
CI01000086_01193934_01219331 NA coding upstream 99464 1193715 ~ 1219440 (-)
CI01000086_01237966_01253245 NA coding upstream 143660 1237911 ~ 1253288 (-)
CI01000086_01257926_01260025 SERPINB1L4, SERPINB14 coding upstream 163675 1257926 ~ 1260025 (-)
CI01000086_01296658_01297947 NA coding upstream 201579 1295830 ~ 1298059 (-)
G299128 NA non-coding downstream 8914 1059004 ~ 1060093 (-)
G299119 NA non-coding downstream 24387 1036036 ~ 1044620 (-)
G299266 NA non-coding downstream 66388 1002265 ~ 1002619 (-)
G299221 NA non-coding downstream 192839 853604 ~ 876168 (-)
G299218 NA non-coding downstream 224828 843740 ~ 844179 (-)
G299283 NA non-coding upstream 83566 1177817 ~ 1237208 (-)
G299299 NA non-coding upstream 134670 1228921 ~ 1231136 (-)
G299331 NA non-coding upstream 247192 1341443 ~ 1346880 (-)
G299321 NA non-coding upstream 259155 1353406 ~ 1354349 (-)
G299322 NA non-coding upstream 276760 1371011 ~ 1373189 (-)
G299173 NA other downstream 301128 765617 ~ 767879 (-)
G298872 NA other downstream 532697 535023 ~ 536310 (-)
G299528 NA other upstream 573955 1668206 ~ 1695177 (-)
CI01000086_01852638_01897719 UBR5 other upstream 799663 1852146 ~ 1897719 (-)
CI01000086_02366362_02373059 SLC6A20 other upstream 1270080 2364331 ~ 2373059 (-)
G299598 NA other upstream 1771431 2865682 ~ 2868103 (-)
G299107 NA other upstream 3482 1126738 ~ 1126798 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location