CI01000086_01101333_01138683


Basic Information

Item Value
gene id CI01000086_01101333_01138683
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000086
NCBI id null
chromosome length 2920448
location 1100760 ~ 1138683 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000086_01101333_01138683.mRNA
TGCCCATCGGGCCGTACCCCCCACCCCTGCAGCAGGTGTTCCAGGCGCCCCGCAGGCCGGGCATGGGCACCGTCGGCAAACCCATCAAGCTGCTTGCCAACTACTTTGAGGTGGAGATCCCAAAAATGGATGTGTACCACTATGAAGTGGACATCAAACCTGATAAGTGTCCTCGGAGGGTCAACAGGGAGGTTGTGGAATACATGGTCCAACATTTCAAACCACAGCTCTTTGGTGACCGAAAGCCAGTGTACGATGGGAAGAAGAATATCTACACTGTTTTAGCGTTACCTATAGGCAGCGAAAAGGTTGACTTCGAGGTGACCATCCCTGGAGAAGGGAAAGATCGCATCTTTAAAGTGTCCATTCGTTGGCTGGCCAAGGTGTCGTGGAGGCTGCTGCAGGAGACGCTGGTCAGCGGACGTCTACAGGTCCCGCTGGACTCTGTCCAAGCCCTCGATGTGGCCATGAGACACCTGGCCTCCATGAGGTACACTCCAGTGGGACGCTCCTTCTTTTCCCCTCCTGAAGGATACTACCATCCTCTGGGTGGAGGCAGAGAGGTATGGTTTGGCTTCCATCAGTCTGTTCGGCCAGCCATGTGGAAGATGATGCTCAACATTGATGTATCTGCAACGGCCTTTTATAAAGCTCAGCCTGTCATTGAGTTCATGTGTGAAGTTCTGGACATCCGCAACATTGACGAGCAGCCGAAGACACTTACCGACTCACAAAGGGTCCGTTTCACCAAGGAGATCAAAGTGAACTGCAAGATAAATTGGCTAGAGGAGCAGCATGACAAAAGCGGAAACATGGTGTGTAACATTGTAGCAGGGCAGCGGTGCATCAAGAAACTGACAGATAATCAAACATCCACCATGATCAAAGCCACGGCACGATCAGCACCAGACAGACAGGAGGAGATCAGCAGACTGATGAAGAACGCTAACTTTAATCTGGATCCCTACATTCAAGAGTTTGGAATCAAAGTGAAGGACGACATGGCCGAGGTGACCGGGAGAGTCCTTCCAGCTCCTATCCTGCAGTACGGTGGTCGGAATCGTGCCATCGCGACTCCCAACCAGGGTGTGTGGGATATGAGGGGAAAGCAGTTCTACAACGGCATTGAGATCAAAGTTTGGGCCATCGCTTGCTTTGCTCCGCAGAAACAGTGTCGGGAAGAGGTTCTCAAGAACTTCACCGACCAGCTGCGTAAGATCTCAAAGGACGCTGGGATGCCCATCCAGGGTCAGCCGTGTTTCTGTAAGTCTGCAGTGTTCCAGCAGCCCGTGATCTTCCTCGGAGCAGATGTTACTCACCCACCGGCTGGTGATGGGAAGAAGCCGTCTATCACTGCTTTGCCAAGCGATGGTGACAAAGGGCTGAGTCACGCAGACGGATACAGAGGCTTGATGATGTGGAGGGAGTGGCGACAGGCCACTTTCTGTAGGGAACATGAGATCAGAGCAATTATCTCATTGTGCCTCATCGTGGGCATTTTAAAGGCTGACTATGAGTCATTTTGTGATGTGAAGAAGCACTGGTCAGACATGATGCAACAAGCCGTAAGTGGGTTAGAGTCAGGGCAGGTGATATGTCATAAGTCTGCATGGGCTCTGGAGGTCCTCATTGTCTTGTCACCTGTGGAATACCCCCATCTGAAGGGGCTTTGTGAGCTTGAGCATTGGATTTTCCCTTGGAACTTGCTCGTTGTTTCTATAGTAATGGTTAGTTGGGGGAAGGCAAAGGGGATCTGTGGAGGGAATTTAAACTATGAGAGATGTCAATTGCTCCTTTTCTGCTTACTAATTTTTCTCGCTTTGCTCATAACAAATTATCTTGTTAGCAACACAGAGCGCCTTTCACCTACAGTAGCTGTGGTGGAATCTCAACCCAGAATGGATCGTATTCATCAGCCGCGCTCTTGGTGTGGTCAGGGTTCAGGCTGTTTTCCTCTGCCATGTATCTTGGCAAATACATGGCCAACCTCTGTCCCTGCAGAACCCGGACCCCCCGTTTTACCAACCTCCATATACTCTGAGAGCATTATATTGCCCAGCCCTACAGCTGTGCAGTTCAGACAGACAAAAAAAAAAACTGGCAAAATGTTCCGACCATGTCCTAATCTCTGGATTACTGTATCTGTCAAAGGTTACATCTTTACCCTATCAAGTGTTGAGCTGTTTGGTGGCTGCAACCCGAGTTACTGTGTCGACCGGTTTGCCAACTGGACACACGCAAAGACATACACGCTTCCCATCGCCGTTCTGTCACTCAGTGCGTCTAAACCCGGTGCCGTGACTGACGCCATTGTGTCCTACCGCCGAGCACTCGGCCTGTTCCCACAACCCAAGCCTCTGTGGATTAGAGCCACAACAGCTTGTAGACACAGTGTTACTTTGCAAACATGCAGTCGCTGCTCACAGTTTTCACCACAGTGTGAACGAGCTCTTGCATTAAAGATTCAGAGGACCGCCTGCACCAGAGCAGCTCAGCTGAATGATGAATTGCTCTTAATCACTCTTACGCTTTCCTTTTAGGGGTATTAATATTTTTTCCTTCATTTGCTTGTTTGATCGTTGTCCTCTTTAAAATTACAGGCTGCATCTGATGCTGTACTCGCTGTAAATGTCTGTCTCCATGGTCACCACATGGTCACTTCTTGCCCGCTTTAGTCCCTGTTTATGGGTCACCTGAGGACAGCGATGGTTTTGCCAGCAATAAGGAGCGGAGATTGGAGTAATCGAATCGCTCCCGGCCCACCTCTCCCAGGCTGCTTTCTCCTCTCTTTTATTAGGATGTTGTGGGCTTCTGTATTGTTACATCAGGTGTTTTTGTCCATGCAAGCAAGAGTCATCAAGCTTTTTGGAATTTTAACATGCCAAAAGCAGGCTGTCTCTGCCCAAATTTTACAGGCATTTTGATGACAGGATGTTGAAATTACGGAGTAATTTCCGACGATCTCATGCTTTCAGAACATAATGACCTGAACTTTGACAGCGAACTGTAACCATGATGCGATAACGATAGGCAAATATGTAGGTTAAGCTGATATGTCGTTATTGGAGATGTAACAACGGTGTCAAGTGTTCAAGTAAACATTCAGAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000086_01101333_01138683.mRNA False 3113 mRNA 0.49 18 1100760 1138683

Neighbor

gene id symbol gene type direction distance location
CI01000086_01069219_01094068 AGO3, EIF2C3, I2C3 coding downstream 6509 1061523 ~ 1094251 (-)
CI01000086_01005334_01006342 NA coding downstream 94418 1004584 ~ 1006342 (-)
CI01000086_00978789_00999074 NA coding downstream 101020 978540 ~ 999740 (-)
CI01000086_00949574_00963179 NA coding downstream 137500 948026 ~ 963260 (-)
CI01000086_00935341_00936321 NA coding downstream 161572 935052 ~ 939188 (-)
CI01000086_01193934_01219331 NA coding upstream 55032 1193715 ~ 1219440 (-)
CI01000086_01237966_01253245 NA coding upstream 99228 1237911 ~ 1253288 (-)
CI01000086_01257926_01260025 SERPINB1L4, SERPINB14 coding upstream 119243 1257926 ~ 1260025 (-)
CI01000086_01296658_01297947 NA coding upstream 157147 1295830 ~ 1298059 (-)
CI01000086_01313364_01320865 NA coding upstream 174339 1313022 ~ 1322014 (-)
G299128 NA non-coding downstream 40667 1059004 ~ 1060093 (-)
G299119 NA non-coding downstream 56140 1036036 ~ 1044620 (-)
G299266 NA non-coding downstream 98141 1002265 ~ 1002619 (-)
G299221 NA non-coding downstream 224592 853604 ~ 876168 (-)
G299283 NA non-coding upstream 39134 1177817 ~ 1237208 (-)
G299299 NA non-coding upstream 90238 1228921 ~ 1231136 (-)
G299331 NA non-coding upstream 202760 1341443 ~ 1346880 (-)
G299321 NA non-coding upstream 214723 1353406 ~ 1354349 (-)
G299322 NA non-coding upstream 232328 1371011 ~ 1373189 (-)
G299173 NA other downstream 332881 765617 ~ 767879 (-)
CI01000086_00587995_00596565 BRAFLDRAFT_115002, ETFB, ETFB.L other downstream 504131 587765 ~ 596739 (-)
G298872 NA other downstream 564450 535023 ~ 536310 (-)
G299528 NA other upstream 529523 1668206 ~ 1695177 (-)
CI01000086_01852638_01897719 UBR5 other upstream 755231 1852146 ~ 1897719 (-)
CI01000086_02366362_02373059 SLC6A20 other upstream 1225648 2364331 ~ 2373059 (-)
G299598 NA other upstream 1726999 2865682 ~ 2868103 (-)

Expression


Co-expression Network