CI01000086_01193934_01219331


Basic Information

Item Value
gene id CI01000086_01193934_01219331
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000086
NCBI id null
chromosome length 2920448
location 1193715 ~ 1219440 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000086_01193934_01219331.mRNA
AATCTCCTGTTGAGTTAGAATGACAAAGAATCCTGTGATGATAAATGGCACATATAGGATAATCATGTTCATTGTTGTTATCAGAATAAGATAAAATGCTCTTTTCTTCATGTGGTTTTTCTCCTCCCTCTCTCTCCTTCTCTCTCCTGGTCCCGACTGCTTCAGAGCTCTGAGAACAGCCACAAGACAAAACAACTGGATGGAGAATAAGAGGAGGAATGCTGTTGAGGAAAACCATATGTATGGCTCTGTTTTGAGAGATACTACAATAAAGATGCAGAACAACAATGAGGAGCTGAGAGTGATTATCCAGGCCGCAGTGCAGCAGATCACTCTATATCTGAGAGTGGGGTCGCAAAGTGCCAATTTTTTCAAATCGTCTGTCTTGACTTTCCGATACTGCATGACATTCAAAGCTTCAAATGTCATCAATCACGTGGTATTGTCATTTCGATACAAGGATCGGTGTTACAGGGTCAGTGTGGCAAACCCAGTTACGCTTGGGTCCACAATTCTGCTCACGATCGCTAAACAGGGATGTAAGGAAGTGGAGGCTTCCATCCCTCGTGACCTTGATGGCACTAGTCATCCAAGGTTTTCAAGGTTTTCCAGGATGAGTGGGAACCCTGTTTACTGCAAAATTCTTACATATTGCACCTTTGAACTTGAAAAGGCACTGACCTACGAGAAGCTCATGGAGTGGACCAAACCAGAGGTCATGCGTCAACAAGAAGTTCAAGTATCTCTGCCCAGATTCAAGATGGAGGAAAAATACGACATGAAGAGTCTTCTGATCAGCATGGGAATGGAGGATGTTTTTGACACACAGAAGGTGAATCTTTCAGGCATGTCCTCCAACAATGACCTGGTGCTGTCGAAGGTGATTCATAAAGCCTTTGTTGAAGTAAACGAGGAAGGAACCGAAGCGGCTGCAGCCACCGGCGCCGTCATGATGACACAATGTTTGATCATCCCAAAGTTCTTCAACGCAGACCATCCATTCCTTTTCTTCATCCGACACAATCCAACCAAGAGCATTTTGTTTTATGGACGCTTCTGCTCTCCATGAGCGAGTCCTGCTGCATGAGACTCTTCCTGCTAGTTTAGGTGGAGATCTGGTGCGAATGAGGAGGAGAGACTCTGGACAACTACTACAAATCAACCTGTCATCTTTTGGTTTAAGAAACATTTATATGTGCCAACAGTATCAGTACCTATTGCAATTTACTGAAGAAAGACTTCTTAAATTAATAGTATTAAATTGTTTTCAGTTTTATATGGTAATAAA

Function

NR:

description
Serpin peptidase inhibitor, clade B (ovalbumin), member 1, like 4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000086_01193934_01219331.mRNA True 1288 mRNA 0.43 5 1193715 1219440

Neighbor

gene id symbol gene type direction distance location
CI01000086_01101333_01138683 NA coding downstream 55032 1100760 ~ 1138683 (-)
CI01000086_01069219_01094068 AGO3, EIF2C3, I2C3 coding downstream 99464 1061523 ~ 1094251 (-)
CI01000086_01005334_01006342 NA coding downstream 187373 1004584 ~ 1006342 (-)
CI01000086_00978789_00999074 NA coding downstream 193975 978540 ~ 999740 (-)
CI01000086_00949574_00963179 NA coding downstream 230455 948026 ~ 963260 (-)
CI01000086_01237966_01253245 NA coding upstream 18471 1237911 ~ 1253288 (-)
CI01000086_01257926_01260025 SERPINB1L4, SERPINB14 coding upstream 38486 1257926 ~ 1260025 (-)
CI01000086_01296658_01297947 NA coding upstream 76390 1295830 ~ 1298059 (-)
CI01000086_01313364_01320865 NA coding upstream 93582 1313022 ~ 1322014 (-)
CI01000086_01670242_01672517 NA coding upstream 450348 1669788 ~ 1674496 (-)
G299128 NA non-coding downstream 133622 1059004 ~ 1060093 (-)
G299119 NA non-coding downstream 149095 1036036 ~ 1044620 (-)
G299266 NA non-coding downstream 191096 1002265 ~ 1002619 (-)
G299221 NA non-coding downstream 317547 853604 ~ 876168 (-)
G299299 NA non-coding upstream 9481 1228921 ~ 1231136 (-)
G299331 NA non-coding upstream 122003 1341443 ~ 1346880 (-)
G299321 NA non-coding upstream 133966 1353406 ~ 1354349 (-)
G299322 NA non-coding upstream 151571 1371011 ~ 1373189 (-)
G299323 NA non-coding upstream 161751 1381191 ~ 1385500 (-)
G299107 NA other downstream 66917 1126738 ~ 1126798 (-)
G299173 NA other downstream 425836 765617 ~ 767879 (-)
CI01000086_00587995_00596565 BRAFLDRAFT_115002, ETFB, ETFB.L other downstream 597086 587765 ~ 596739 (-)
G298872 NA other downstream 657405 535023 ~ 536310 (-)
G299528 NA other upstream 448766 1668206 ~ 1695177 (-)
CI01000086_01852638_01897719 UBR5 other upstream 674474 1852146 ~ 1897719 (-)
CI01000086_02366362_02373059 SLC6A20 other upstream 1144891 2364331 ~ 2373059 (-)
G299598 NA other upstream 1646242 2865682 ~ 2868103 (-)

Expression


Co-expression Network