CI01000086_01237966_01253245


Basic Information

Item Value
gene id CI01000086_01237966_01253245
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000086
NCBI id null
chromosome length 2920448
location 1237911 ~ 1253288 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000086_01237966_01253245.mRNA
ACAAACAGCTCCACATGATTACACTGATCAAACTTAGTCCATGATGGCGTACAAAATCCCTGATGAAAAGAAAGAAAACAAAGGACACTCGCTCAGCTGTTATGAGTGCACGAGTCTGGACGATACTTGTGCAAATCCAATGGTAAAAACATGCCCCAATGGATCTTCTCAGTGTCTTGAAAAGGCAGTGACCTACGAGAAGCTCATGGAGTGGACCAAACCCAGCAAGATGATTCTAGAGGAAGTTCAACTATCTCTGCCCAAATTTAAGGTGGAGGTAACCTATGATAAAATGAGGAGTCTTCTGATCAGCATGGGAATGGAGGATGTTTTTGACAAGCAGAAGGTGAATCTTTCAGGCATGTCCTCCAACAACGACCTGGTGCTCTCGCAGGTGATTCATAAAGCCTTCGTTGAAGTAAACGAGGAAGGAACCGAAGCGGCTGCAGCCACTGCCACCATCCTTGAGAAAATAACCTCATTACCCTCATCCTCAAAATCCTTTACTGCAGACCACCCGTTCCTTTTCTTCATCCGGCATAATCCCTCCAATGCCATTCTGTTCTATGGACGCTTGAGTTCTCCTTGAAGAATGTGATGATAAAGTGATCATTCTAGATGACTGTGTTCCTCTGATAAATAAA

Function

NR:

description
Serpin peptidase inhibitor, clade B (ovalbumin), member 1, like 4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000086_01237966_01253245.mRNA True 644 mRNA 0.44 3 1237911 1253288

Neighbor

gene id symbol gene type direction distance location
CI01000086_01193934_01219331 NA coding downstream 18471 1193715 ~ 1219440 (-)
CI01000086_01101333_01138683 NA coding downstream 99228 1100760 ~ 1138683 (-)
CI01000086_01069219_01094068 AGO3, EIF2C3, I2C3 coding downstream 143660 1061523 ~ 1094251 (-)
CI01000086_01005334_01006342 NA coding downstream 231569 1004584 ~ 1006342 (-)
CI01000086_00978789_00999074 NA coding downstream 238171 978540 ~ 999740 (-)
CI01000086_01257926_01260025 SERPINB1L4, SERPINB14 coding upstream 4638 1257926 ~ 1260025 (-)
CI01000086_01296658_01297947 NA coding upstream 42542 1295830 ~ 1298059 (-)
CI01000086_01313364_01320865 NA coding upstream 59734 1313022 ~ 1322014 (-)
CI01000086_01670242_01672517 NA coding upstream 416500 1669788 ~ 1674496 (-)
CI01000086_01852638_01897719 UBR5 coding upstream 598858 1852146 ~ 1897719 (-)
G299283 NA non-coding downstream 703 1177817 ~ 1237208 (-)
G299299 NA non-coding downstream 6775 1228921 ~ 1231136 (-)
G299128 NA non-coding downstream 177818 1059004 ~ 1060093 (-)
G299119 NA non-coding downstream 193291 1036036 ~ 1044620 (-)
G299331 NA non-coding upstream 88155 1341443 ~ 1346880 (-)
G299321 NA non-coding upstream 100118 1353406 ~ 1354349 (-)
G299322 NA non-coding upstream 117723 1371011 ~ 1373189 (-)
G299323 NA non-coding upstream 127903 1381191 ~ 1385500 (-)
G299345 NA non-coding upstream 147647 1400935 ~ 1401281 (-)
G299107 NA other downstream 111113 1126738 ~ 1126798 (-)
G299173 NA other downstream 470032 765617 ~ 767879 (-)
CI01000086_00587995_00596565 BRAFLDRAFT_115002, ETFB, ETFB.L other downstream 641282 587765 ~ 596739 (-)
G298872 NA other downstream 701601 535023 ~ 536310 (-)
G299528 NA other upstream 414918 1668206 ~ 1695177 (-)
CI01000086_02366362_02373059 SLC6A20 other upstream 1111043 2364331 ~ 2373059 (-)
G299598 NA other upstream 1612394 2865682 ~ 2868103 (-)

Expression


Co-expression Network