CI01000086_01257926_01260025 (SERPINB1L4, SERPINB14)


Basic Information

Item Value
gene id CI01000086_01257926_01260025
gene name SERPINB1L4, SERPINB14
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000086
NCBI id null
chromosome length 2920448
location 1257926 ~ 1260025 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000086_01257926_01260025.mRNA
GTCCTGGGCTTTAACAATCCTCCCAAACCCAACGCTGCGACTCCAGCACCTCAACAACACACCCAGAAGCCCCAGATAACATGTGGCGTCAAGGGTCAACATGATCCATCAATGATGCAACAAACCCAGAAGTTTGAGATACCTGCCGAACTCAAGAAATGTCCTGCTCAGCCAGTACCTGGACCAAAAACTGAGGACCAAATTCATTTGAGCTTCAACAAGTTTATGAGTGAGCTGAACAAACCAGGAGTCCCGTATGTGTTGAGTGTTGCCAACCGCCTCTATGGAGAGCAGTCCTACCAGTTTGTTGAGAAATTCCTCAATGATGCAAAAAGATACTATGAAGCTGGACTGGAGGCGGTGGACTTCAAGACCAAATCAGAGGCTGCTCGTGTCAACATCAATAAATGGGTGGAGAAAAAAACACAAGAGAAGATCAAGGACTTGCTGCCACAGGGAGCTGTTGATGCGATGACGAGACTGGTCTTGGTTAACGCCATCTACTTCAAGGGGAACTGGGAGAAGAAATTCCCAAAAGACGCCACTAGAGACAGGCAGTTTAAGATGAACCAGAATCAAACTAAACCAGTGAAGATGATGCATCAAAAGGCGCAGTTTCCTCTGGCCTTCATCCCAGAGATGAACAGTCAGGTTCTGGAGCTGCCGTATGTTGGGAAGAATCTCAGTATGTTGATCATCCTTCCTAATGAGATGGAAGATAACATCACTGGCCTTCAGAAGCTTGAAAAGGCACTGACCTACGAGAAGCTCATGGAGTGGACCAAACCCAGCAACATGCGTCAACAAGAAGTTCAAGTATCTCTGCCCAGATTCAAGATGGAGGAAAAATATGACATGAAGAGTCTTCTGATCAGCATGGGAATGGAGGATGTTTTTGACACGCAGAAGGTGAATCTTTCAGGCATGTCCTCCAACAACGACCTGGTGCTGTCGAAGGTGATTCATAAAGCCTTTGTTGAAGTAAACGAGGAAGGAACCGAAGCGGCTGCAGCCACCGGTGCTGTTGTTGCAGTACGTTCATTTGCACAGATGTTCAACGCAGACCACCCGTTCCTTTTCTTCATCCGGCATAATCCCTCCAATGCCATTCTGTTCTATGGACGCTTCTGTTCTCCTTGA

Function

symbol description
serpinb1l4 Predicted to enable serine-type endopeptidase inhibitor activity. Predicted to be involved in negative regulation of endopeptidase activity. Predicted to be active in extracellular space. Human ortholog(s) of this gene implicated in peeling skin syndrome. Orthologous to several human genes including SERPINB8 (serpin family B member 8).
serpinb14 Predicted to enable serine-type endopeptidase inhibitor activity. Predicted to be involved in negative regulation of endopeptidase activity. Predicted to be active in extracellular space. Human ortholog(s) of this gene implicated in autosomal recessive nonsyndromic deafness 91 and peeling skin syndrome. Orthologous to several human genes including SERPINB6 (serpin family B member 6) and SERPINB8 (serpin family B member 8).

NR:

description
Serpin peptidase inhibitor, clade B (ovalbumin), member 1, like 4

GO:

id name namespace
GO:0005615 extracellular space cellular_component

KEGG:

id description
K13963 SERPINB; serpin B

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000086_01257926_01260025.mRNA False 1140 mRNA 0.47 6 1257926 1260025

Neighbor

gene id symbol gene type direction distance location
CI01000086_01237966_01253245 NA coding downstream 4638 1237911 ~ 1253288 (-)
CI01000086_01193934_01219331 NA coding downstream 38486 1193715 ~ 1219440 (-)
CI01000086_01101333_01138683 NA coding downstream 119243 1100760 ~ 1138683 (-)
CI01000086_01069219_01094068 AGO3, EIF2C3, I2C3 coding downstream 163675 1061523 ~ 1094251 (-)
CI01000086_01005334_01006342 NA coding downstream 251584 1004584 ~ 1006342 (-)
CI01000086_01296658_01297947 NA coding upstream 35805 1295830 ~ 1298059 (-)
CI01000086_01313364_01320865 NA coding upstream 52997 1313022 ~ 1322014 (-)
CI01000086_01670242_01672517 NA coding upstream 409763 1669788 ~ 1674496 (-)
CI01000086_01852638_01897719 UBR5 coding upstream 592121 1852146 ~ 1897719 (-)
CI01000086_01915013_01921794 AZIN1A coding upstream 654988 1915013 ~ 1921794 (-)
G299283 NA non-coding downstream 20718 1177817 ~ 1237208 (-)
G299299 NA non-coding downstream 26790 1228921 ~ 1231136 (-)
G299128 NA non-coding downstream 197833 1059004 ~ 1060093 (-)
G299119 NA non-coding downstream 213306 1036036 ~ 1044620 (-)
G299331 NA non-coding upstream 81418 1341443 ~ 1346880 (-)
G299321 NA non-coding upstream 93381 1353406 ~ 1354349 (-)
G299322 NA non-coding upstream 110986 1371011 ~ 1373189 (-)
G299323 NA non-coding upstream 121166 1381191 ~ 1385500 (-)
G299345 NA non-coding upstream 140910 1400935 ~ 1401281 (-)
G299107 NA other downstream 131128 1126738 ~ 1126798 (-)
G299173 NA other downstream 490047 765617 ~ 767879 (-)
CI01000086_00587995_00596565 BRAFLDRAFT_115002, ETFB, ETFB.L other downstream 661297 587765 ~ 596739 (-)
G298872 NA other downstream 721616 535023 ~ 536310 (-)
G299528 NA other upstream 408181 1668206 ~ 1695177 (-)
CI01000086_02366362_02373059 SLC6A20 other upstream 1104306 2364331 ~ 2373059 (-)
G299598 NA other upstream 1605657 2865682 ~ 2868103 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_011084 zgc:173729 coding NC_007127.7 CM002900.2 51281959 ~ 51288178 (-)