CI01000086_01313364_01320865


Basic Information

Item Value
gene id CI01000086_01313364_01320865
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000086
NCBI id null
chromosome length 2920448
location 1313022 ~ 1322014 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000086_01313364_01320865.mRNA
ATACTGAAAAAGAAAAAGAAAAAATGTGGTTATAATAAAACCTATATACTGTATATAATATATATTTGTAGTCAATACTAAAAGAGGTGTGTGACTACACAGAAATTGAGTAAAAGTGTGACAAATAGGCATGTTCTACAATACACTGTTTTTTGTTTTTTAAAAGAAATTGATACTTTTATTCAGCAAGGACACATTAAATTGATTAAAAGTGCCAGTAAAGCCATTTATAATGTTACAAAAGACTTCTATTTGAAATAAATGCTGTTCTAAACTTTCTATTCATCAAAGAATCCTGGAAGAAAAATGTATCATGGTTTCCACAAAAATATGAAGCAGTTTTTAACATTAATAATAATCAGAAATGTTTCTTGCACAGCAAATCAGCATATTAGAAAGATTTCTGAAGGATCATGTGACAGAATGGCTTAAAACCCTCTTAACTGTGAAAAAATACCTGCTTTCATAAATTGGCAGAAAAAACAATATGATACATAAGACTCCATTGTCCAATTTAGATGATTGATAGAATGACAGAAGGACAAACAGATAGACAGAAGAAGTTAACAATCCAAGACAGACATGAAAGAAGGATTTTCTTCTGATTGTTTGTCTCATCTGAGAGATTACGAACGCTAAACAAAACAACGTGAGGGCACAGAGCTCCAGACCAGATGTAGACTCTAAACAAAAGAGTCATGATGGGGTCGGTAGGGAGTGTGGAGGGTCAAAGGTCAGGGCAAAGGGAAAGGTAAAAGAGACCAGAGTCCAAGATCTACAGAAAAACACATTTTAAACTATGTATGCACATACAGAGAGACCCAAAATTGAAACCAACCAGTAAAAAGATTACAAATGTTATAGTACTGACTGTACAACCTCTACAAAATCAAAAGAACAAAATGAGAATAAGTGGAGAAAATATGTTGAATGGACATGAAAATGTCAATGCAAAAAATGCACAATGTTTAATTTTCTTTATGCAACATAATTTGTGAAATGTGACCTGATTTTCACAAAACATGCTGAATCTGACAGAATGCATGTTTTCCCCCTTTCTGTCAGGCAACTTTGCTGTTAGAAAGAAAAAAAGTCATTAATTATTCAGGTTAACTGGCACATTTCCAAACCAAATCTATAAAGTCACAGATGGTGTATGCACAGATCCGGAGCAACGGGCACATGCTCAGCCAGCGTATGCTTCAAACGTATGGGGCCTCAAATGCAAAGACGCAAATGGTCCCAGCATTCAGACAGGAAGCTGGGTTTACACTGACTTCCTACCCTGAAGATGTACTGAGATGCTGCAGAGAAACTGGACCTCTGAACAACGAGAGGTGTTGTAAAAATGGCATATGTGCTTTGACCATCGCTACAGCCTACTGTACTGTAATGAGTGCAGGTCAGTTCCCCCAAACAATCTCCCTCTGCTGTCGTGTTTGTGGTGGGGTCAGTTTACACTCATACCTGCCCGCCCACCGTAGTGGGATGATCCCGGTACATCCACGAGACACAGACGCTCCTCCGGCATTCAGTTCAGAAACCAATGAGCCGCAATCGACACAGCTCGTGTTGGACAGTAAACGGAGATTACCAGAGCTTTCACATGTGGATACGGATCACGACACACGGTAAGAGCAAATATAGCACTTAAGTATACGACTAGTGATTAATATCCCACCAGATAATGTTCATTCAGCATTTATAGCGAATTTACAGTCTTGTCGAATCTGAAGTCGCGTCGTTTTCATGTTCGTGTGTCTGTAAACAAACACCTGAATATAAACGGTCATTGATCTTAAAATTATTATAAGTTCAGTTTGAGGACTCCAGTATGTAGGCTATGTATGAATCGAATAATTATTATTTTTTCCTGTAAATAATTGATGTCACTGCAGCTTTCTTTGAGGTTTATGTGGATACTTTGGAGATAAAAGTACAAATTGTGTATGTGTTTAAATATGAAAGATAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000086_01313364_01320865.mRNA True 1977 mRNA 0.37 4 1313022 1322014

Neighbor

gene id symbol gene type direction distance location
CI01000086_01296658_01297947 NA coding downstream 14963 1295830 ~ 1298059 (-)
CI01000086_01257926_01260025 SERPINB1L4, SERPINB14 coding downstream 52997 1257926 ~ 1260025 (-)
CI01000086_01237966_01253245 NA coding downstream 59734 1237911 ~ 1253288 (-)
CI01000086_01193934_01219331 NA coding downstream 93582 1193715 ~ 1219440 (-)
CI01000086_01101333_01138683 NA coding downstream 174339 1100760 ~ 1138683 (-)
CI01000086_01670242_01672517 NA coding upstream 347774 1669788 ~ 1674496 (-)
CI01000086_01852638_01897719 UBR5 coding upstream 530132 1852146 ~ 1897719 (-)
CI01000086_01915013_01921794 AZIN1A coding upstream 592999 1915013 ~ 1921794 (-)
CI01000086_01948087_01983560 SPIRE1 coding upstream 625993 1948007 ~ 1983560 (-)
CI01000086_01994840_02008387 TPPP coding upstream 672581 1994595 ~ 2008387 (-)
G299283 NA non-coding downstream 75814 1177817 ~ 1237208 (-)
G299299 NA non-coding downstream 81886 1228921 ~ 1231136 (-)
CI01000086_01069219_01094068 AGO3, EIF2C3, I2C3 non-coding downstream 240358 1061523 ~ 1094251 (-)
G299128 NA non-coding downstream 252929 1059004 ~ 1060093 (-)
G299119 NA non-coding downstream 268402 1036036 ~ 1044620 (-)
G299331 NA non-coding upstream 19429 1341443 ~ 1346880 (-)
G299321 NA non-coding upstream 31392 1353406 ~ 1354349 (-)
G299322 NA non-coding upstream 48997 1371011 ~ 1373189 (-)
G299323 NA non-coding upstream 59177 1381191 ~ 1385500 (-)
G299345 NA non-coding upstream 78921 1400935 ~ 1401281 (-)
G299107 NA other downstream 186224 1126738 ~ 1126798 (-)
G299173 NA other downstream 545143 765617 ~ 767879 (-)
CI01000086_00587995_00596565 BRAFLDRAFT_115002, ETFB, ETFB.L other downstream 716393 587765 ~ 596739 (-)
G298872 NA other downstream 776712 535023 ~ 536310 (-)
G299528 NA other upstream 346192 1668206 ~ 1695177 (-)
CI01000086_02366362_02373059 SLC6A20 other upstream 1042317 2364331 ~ 2373059 (-)
G299598 NA other upstream 1543668 2865682 ~ 2868103 (-)

Expression


Co-expression Network