CI01000086_01413340_01416793 (MAN1C1)


Basic Information

Item Value
gene id CI01000086_01413340_01416793
gene name MAN1C1
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000086
NCBI id null
chromosome length 2920448
location 1413295 ~ 1416815 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000086_01413340_01416793.mRNA
GTTTAAATGGTGTTCCGAAAGTTACCCGGTGTCTCAGCATCGGGCATGGGGCTTCGTCTGTCTCAGAAATTTGTCTTTCTGCTGTTCCTGTCGGGGTTGGTAACTCTGTGCTTCGGGGCTCTTTTCTTTTTACCCGACTCCGTGCGTCTGAAGCGGATCTTCCTCTCCAAGAGCGAGAATCCCGCCGTGACCGTGGGCTCCGACAATGAGCTTTCCAAAAAGGTGCCCGTGGATCAAGAGCATCAGCGGGCGGGTATAAAGGGGGGTGAGGCGAATGTCAAACTGAAAGTGAGCCGCAAGCCCTCGGTCACCCATGGAGCGAGAACTGTGGAGAGATCTGTTGGGAGTAAAGCGCAGGACGAGTGGAGTCCGGCGAGGGCGCACGAACCGGCGGCCAGGGACGAGCGGGTCACCTCGGCCGCTCACAACGGCCAGCGCGGCAGCGCTTTCAGCTATGAGATGTTTAAAAAGTGCCTGCTGAAACCAGCTTTGGGGAAGGACCAGGGAAATCCATCTGATTCCGAGACGCTTCAGCGGAGGGAGAAAGTCAAAGAGCTGAAATTCTCCTTTGAATTTTCTATTGTTATATCATATTTCACAGTGTCAGAAGCGCTGGATGCTTTCCAAAGCCACGGGGTATTTATAAAACGCTGTGGTGGCAAAGCCAGTATTGGACAGTTTCTTACCTTGCTGTAGGCTGGAGTCATAAAATGAAAGA

Function

symbol description
man1c1 Predicted to enable mannosyl-oligosaccharide 1,2-alpha-mannosidase activity. Predicted to be involved in N-glycan processing. Located in extracellular exosome.

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000086_01413340_01416793.mRNA True 718 mRNA 0.53 2 1413295 1416815

Neighbor

gene id symbol gene type direction distance location
CI01000086_01371003_01393249 SLC9A1 coding upstream 19488 1371003 ~ 1393807 (+)
CI01000086_01265644_01273085 NA coding upstream 139849 1265364 ~ 1273446 (+)
CI01000086_01150842_01165271 DHDDS coding upstream 247539 1150842 ~ 1165922 (+)
CI01000086_01098078_01098642 NA coding upstream 314490 1097935 ~ 1098805 (+)
CI01000086_01053732_01056868 NA coding upstream 356176 1053357 ~ 1057119 (+)
CI01000086_01492811_01493179 NA coding downstream 75996 1492811 ~ 1494000 (+)
CI01000086_01506402_01526965 NA coding downstream 89444 1506259 ~ 1527057 (+)
CI01000086_01546688_01584240 NA coding downstream 129361 1546176 ~ 1589583 (+)
CI01000086_01626671_01626957 NA coding downstream 209856 1626671 ~ 1627917 (+)
CI01000086_01630097_01641734 MAN1C1 coding downstream 213282 1630097 ~ 1641869 (+)
G298391 NA non-coding upstream 152657 1237921 ~ 1260638 (+)
G298413 NA non-coding upstream 183861 1229030 ~ 1229434 (+)
G298386 NA non-coding upstream 188949 1188408 ~ 1224346 (+)
G298382 NA non-coding upstream 228838 1179163 ~ 1184457 (+)
G298377 NA non-coding upstream 267739 1145280 ~ 1145556 (+)
G298214 NA non-coding downstream 2627 1419442 ~ 1427548 (+)
G298234 NA non-coding downstream 65626 1482441 ~ 1486554 (+)
G298472 NA non-coding downstream 238735 1655550 ~ 1656075 (+)
G298485 NA non-coding downstream 251397 1668212 ~ 1695255 (+)
G298381 NA other upstream 236379 1172156 ~ 1176916 (+)
G298366 NA other upstream 265428 1136660 ~ 1147867 (+)
G298208 NA other upstream 433185 947191 ~ 980110 (+)
CI01000086_00499939_00501377 NA other upstream 911179 498625 ~ 502116 (+)
G298529 NA other downstream 460075 1876890 ~ 1881453 (+)
CI01000086_02807666_02845401 PHLDB3, ETHE1 other downstream 1390768 2806368 ~ 2845762 (+)

Expression


Co-expression Network