CI01000086_01492811_01493179


Basic Information

Item Value
gene id CI01000086_01492811_01493179
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000086
NCBI id null
chromosome length 2920448
location 1492811 ~ 1494000 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000086_01492811_01493179.mRNA
ATTTAAAGAAGGTTGTGACTCACACAAGCCCTCTCCTGTGGAGGTCCACATATTTGACGGCAGGGCTGTGTAAGTCGCGTATCATCCCTCAGGAATCAGAGGCCAGTGAGACCTCTGAGATGTTCTCAACTGTAGACCCGGGGACATTCATTACTTCCCAGCGTTCTCCTGTAGATAAACAGCCATTTGTCACTGCAGACTTTCATGAACAGAGGTGTCTCGAGAGTCGGCTGGGAGGTTGTGCGTGGAAGCCAAAGAAAACAGAATGGGATCTATTTATCAAGCCAGCCTGTTCTGTTTACCATCTGTGATGAACAACGCTGAGCCAAAGTACCTGCAGTTTCCCATTTCCAATAAGCATCTAAGCTGGGAAGGCGGCAGGGAAGCCCGTCTAGACCGCCAAACCCAGCAGATGAATAACTATACGTACACATGAACTACGCACACTCTCTATGTCTCACGCCATCTCCATCTGTCTCATTCTTAAGCACAAAGTATACTTCCACTGTCCGCAACTCTGCAAAAAGATATAGCTGCAGACCAGAGAACTCCAAAACGGGGCATGAACTCCAAAAGTGGGCGGTACCTCCAAAAAGGGGAGGTGTCTCTTGCATGCAAAGACTTTCGCTTCCGCATGCTATATTCCGCACTGTCTACGTCTATGGCACATTGAAGTCCTTGGGACTGAGAAAACATATGCTGATTAATAATGCTAAATGTATGGAAAAAACAGACCGTCTAAATGTGCCACGCAAGGCTTGAATGAAGTGCGTTTGGCTGTAGATAAAAATATTAGAGGATGTAGCACCGAAAGATCATTACCGTGAACAACTCTGAGCACATGTGGTGTGAACCGCTCCGTTGTTTTACCGCGCTGCTCGCTTTAAACTGGAAACGGTAAAATGACTCAATTATGTCCCGCGGTCTGGATTAAACCAAGCCGGTCCGCCATTTGAACACCATTGCTTAGCATGGCTTCTGTATTATACAAAAATGTTAATTCTTTAAATGTATTAAAATTTTACATTTTATTTATTTGTTTATTTATTTGAGTTATTAATCCTTGGTCACGGTTTGGCTGGTTAGCATGGTCTAGTTAGCCTTTGCTGGTAGATGCCACAACTATAAAGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000086_01492811_01493179.mRNA True 1132 mRNA 0.45 2 1492811 1494000

Neighbor

gene id symbol gene type direction distance location
CI01000086_01413340_01416793 MAN1C1 coding upstream 75996 1413295 ~ 1416815 (+)
CI01000086_01371003_01393249 SLC9A1 coding upstream 99004 1371003 ~ 1393807 (+)
CI01000086_01265644_01273085 NA coding upstream 219365 1265364 ~ 1273446 (+)
CI01000086_01150842_01165271 DHDDS coding upstream 327055 1150842 ~ 1165922 (+)
CI01000086_01098078_01098642 NA coding upstream 394006 1097935 ~ 1098805 (+)
CI01000086_01506402_01526965 NA coding downstream 12259 1506259 ~ 1527057 (+)
CI01000086_01546688_01584240 NA coding downstream 52176 1546176 ~ 1589583 (+)
CI01000086_01626671_01626957 NA coding downstream 132671 1626671 ~ 1627917 (+)
CI01000086_01630097_01641734 MAN1C1 coding downstream 136097 1630097 ~ 1641869 (+)
CI01000086_01721518_01734414 NA coding downstream 227518 1721518 ~ 1734710 (+)
G298234 NA non-coding upstream 6257 1482441 ~ 1486554 (+)
G298214 NA non-coding upstream 65263 1419442 ~ 1427548 (+)
G298391 NA non-coding upstream 232173 1237921 ~ 1260638 (+)
G298413 NA non-coding upstream 263377 1229030 ~ 1229434 (+)
G298386 NA non-coding upstream 268465 1188408 ~ 1224346 (+)
G298472 NA non-coding downstream 161550 1655550 ~ 1656075 (+)
G298485 NA non-coding downstream 174212 1668212 ~ 1695255 (+)
G298503 NA non-coding downstream 203180 1697180 ~ 1697542 (+)
G298512 NA non-coding downstream 216686 1710686 ~ 1711001 (+)
G298381 NA other upstream 315895 1172156 ~ 1176916 (+)
G298366 NA other upstream 344944 1136660 ~ 1147867 (+)
G298208 NA other upstream 512701 947191 ~ 980110 (+)
CI01000086_00499939_00501377 NA other upstream 990695 498625 ~ 502116 (+)
G298529 NA other downstream 382890 1876890 ~ 1881453 (+)
CI01000086_02807666_02845401 PHLDB3, ETHE1 other downstream 1313583 2806368 ~ 2845762 (+)

Expression


Co-expression Network