CI01000086_01506402_01526965


Basic Information

Item Value
gene id CI01000086_01506402_01526965
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000086
NCBI id null
chromosome length 2920448
location 1506259 ~ 1527057 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000086_01506402_01526965.mRNA
GCATAAAACGGGTCTGAAATTTTCGCGCCGTCTTGCAGTAAGATGCTTCCGCCCCTGCACGACCTGTTTTAATGGCCTCTCTACGCGTGAATTATTCATGAGGTCTTTAAGTAGGAGACTGGCCGTGGTGTCGCTGGATACCCATGAGGCCTGTTGGCATGAGTGATGTGGAGTTTCTAATGATCAAATTAGCCTCCTCTATAATAGGCAGCTGTTGCCTTGGGGCTGCAGGTAATCCTGAAGGTAAATCGCTTCCCAGACCAAATCACTCCGGTGGTCTGCGCCTGAAATTACTTGTGGTCTCTAGACTGGGGGTCAGCTGCGATTTGGACCAGACACGATCCAACACGATCCCGGTGGAGTCTGGCCTACGAGCGCTGGGGAAGAAAGTCTTTTTCAGACCTTGCCTTGTGGAGGTTGTTGGTGCCAGGCGTCATCCAAAGCTCCTGGCTGTGCTGAAATACTCGTTCAGAGCTCAAGCCCAGGAGACACGCAGATCCATGACTGCAGATCTGCTGCTGGAGTTCAGAGGTTTGGAAGCAGCAATGATGAAGTTTGCCTGGGACAACTATAAACAGTACGCTTGGGGCAAGAATGAACTTCGGCCCCTGACCAGGAATGGACACATTGGGAATATGTTTGCAGCTCTCTTGGCGAGCGGATCTGTGCGTGTGCTGGTGCTCAGAGCTGCAGGCCATTACTGTTCATTACAGACAGAGCCAGAGGTCAGCGGGGTCACTGGATACAGTAACACAGCTGTAATAGAGTGATGAGAAACCGATGGCACAGGACAGAGAGCAGCGCTCGAGGACATCAAACGCACGACTCTTAGAGAGACATTTGAAGATAAAGACCTTGAACA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000086_01506402_01526965.mRNA True 862 mRNA 0.51 5 1506259 1527057

Neighbor

gene id symbol gene type direction distance location
CI01000086_01492811_01493179 NA coding upstream 12259 1492811 ~ 1494000 (+)
CI01000086_01413340_01416793 MAN1C1 coding upstream 89444 1413295 ~ 1416815 (+)
CI01000086_01371003_01393249 SLC9A1 coding upstream 112452 1371003 ~ 1393807 (+)
CI01000086_01265644_01273085 NA coding upstream 232813 1265364 ~ 1273446 (+)
CI01000086_01150842_01165271 DHDDS coding upstream 340503 1150842 ~ 1165922 (+)
CI01000086_01546688_01584240 NA coding downstream 19119 1546176 ~ 1589583 (+)
CI01000086_01626671_01626957 NA coding downstream 99614 1626671 ~ 1627917 (+)
CI01000086_01630097_01641734 MAN1C1 coding downstream 103040 1630097 ~ 1641869 (+)
CI01000086_01721518_01734414 NA coding downstream 194461 1721518 ~ 1734710 (+)
CI01000086_01779573_01833077 MYOM3 coding downstream 252516 1779573 ~ 1833077 (+)
G298234 NA non-coding upstream 19705 1482441 ~ 1486554 (+)
G298214 NA non-coding upstream 78711 1419442 ~ 1427548 (+)
G298391 NA non-coding upstream 245621 1237921 ~ 1260638 (+)
G298413 NA non-coding upstream 276825 1229030 ~ 1229434 (+)
G298386 NA non-coding upstream 281913 1188408 ~ 1224346 (+)
G298472 NA non-coding downstream 128493 1655550 ~ 1656075 (+)
G298485 NA non-coding downstream 141155 1668212 ~ 1695255 (+)
G298503 NA non-coding downstream 170123 1697180 ~ 1697542 (+)
G298512 NA non-coding downstream 183629 1710686 ~ 1711001 (+)
G298381 NA other upstream 329343 1172156 ~ 1176916 (+)
G298366 NA other upstream 358392 1136660 ~ 1147867 (+)
G298208 NA other upstream 526149 947191 ~ 980110 (+)
CI01000086_00499939_00501377 NA other upstream 1004143 498625 ~ 502116 (+)
G298529 NA other downstream 349833 1876890 ~ 1881453 (+)
CI01000086_02807666_02845401 PHLDB3, ETHE1 other downstream 1280526 2806368 ~ 2845762 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_010297 NA non-coding NC_007127.7 CM002900.2 51559132 ~ 51707952 (+)