CI01000086_02226264_02227472


Basic Information

Item Value
gene id CI01000086_02226264_02227472
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000086
NCBI id null
chromosome length 2920448
location 2225543 ~ 2227625 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000086_02226264_02227472.mRNA
ATATAAAATGCTCACTTTTTTAATTGCTATTACACAATTTTATAATTATACTGAATGATGTCACATTAAAGTGAATATATTGACAATTTTCTTTATGCAAAATATATAATTCTTGCTTTTTTAACGCTCTATTATTATTTTATCATTAATAATTTAGATTTTAATTGCTATTATACAATTTTATAATTATAGTGAATGTTAAGTTATAATTAATAATATAGACCATTTATATTTTATGCTAAATATGATTTCTCCTGTTTTTTTCTTTTGATTTTGAGGTGAAACAGAATACAAAAATTTCTTTATGAGATTCACCCAAGTATTTTTACTTCAAAAAATATATTTTAAAATATATATTTGTGGTATCGTAGCTGTAATCATAATATTCAATCAGCAAGTCTTTGATAGATATTATAAATTAAAAGGTAAATGAAATATATTTAGATGCATATAAGACATTATTTAATTCAGTTAGTATTTCCTTGTTATAGTAAAAATGTTTTATATAAACCTGTTGTAAACTTTCTCTGTTGTTCAAGTATAAAGTGATTTTCCCCTTCTCACCACTGGAGGGCAGTATAGACCCACAGCTCATTTTAACATAGTCACGTGATCATGTTTATCCATTGCAGGCTGCTGTCGTAAAACCCTCTCTCATCCTTCTACTCTTCCTGCCAGTCATTAGGCCAGTGTTTATATAAAGGCCAGGATCATCAACAGCATGTCCGAGACGCCCGTCCAACCACATATGAGAGCGGAAGACATTCTAGCAGAGATCCGAGCAAACCTGCTGGAGTGCAAAGTGTGTTTTGAGAAGTTCTCCATTCAGAAGCGAGACCACACACCCCGAAATCTTCTCTGTGGCCACGTGCTGTGTCTCAAATGCATTTGTGCACTTTCCCATCCTGTAAACCAGAGGCTGGAGTGTCCCTTCTGTAGGAAACTGGGGGACGTTGGCAGCACCTCCGAATGCCGTGCGCTCACCGATCTCCAGGAGCTTCTGCTGTCAAAAGCTTGTCCCAGGTTGTATGATAGAGTCATGGGATGGACTGAAAGCTTGGGATCTGGGATGCTGCGCCTCCGTTCGGCCTTTGGAGGATGGGGAAACATTGTTAACCCTTCAGGGATGGTTGTTTCTGAAACATCAGGACAGATTGTTTTGGTGCACGATGGTGAGAAAAGAGTTGCCGTTTTTGGTGCGCAAGGAACTCTTTTGGACGGCTTTGGACTTTATGGACACGACCCGTCTGATTTATGTCACCCACTTGATGTTGCGTTGACCAAAAGTGGACATGTTTTGGTCACAGATGGTGGTGACCAATCAGTCAAAGTCTTCACTTCCAAAGGCCATCTTGTGGTGGCCATCCGAGACTCTTTTCGGCTGCCGTGGGGTGTTGATGTGGACACCCGTGGATGTGTTTTTGTGACCGACGCTGAGATGGGAACACTTAGCCAGGTCATAATAGACTTTTCTCGTGGGGTAGTCCTAGTTAACAGAGTGGTTTTCAAAGATCTTACGTGTCCACGTACAGTAGCTTCTTGCAAAGCATCGGGAAACATCGCAATTGTGGAGCGTTTTCAGGCCGGATTCAATGCTTCATGTTTGAGAATATTCAATAGCGATTTTGTTCCTTTGACGCAGGTGGACAGTTTCACTCTTAACTTGAAGAACTCTCTGAGTTTGTCTATATCTTCAGTGGTTTTTGATCGAAATGGAGATGTGATTGTAGGGGATGTGCAGAACGGGATGGTCTGGAATTTGGGAAAGCCGCAGGAAACACCTGCGCTGACTCCACTAGTGAGTGGACTGCGGCGTCCAGTGGCATTGGCTGTGACAACACTGAATGTGCTTGTTGTCTTGGACGGAGGAGATCATGCAGTCAAGTTCTATGCGGCAGACACAGATGATTTGTACTGTGATAAAAAATGAGAGGTGTGAATACACAACTAGTGTGTTCGACAAAGTAGAATCCATGTATGCTGTTTAGGTGGATTGAGGTGTGATGATGGGATTTTGGTGTGTGTTGTGAGTTGATGTTGTGTAAATGGTGTTTCATGGCATGATGGCTAAAGCTCAAAGCTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000086_02226264_02227472.mRNA True 2083 mRNA 0.40 1 2225543 2227625

Neighbor

gene id symbol gene type direction distance location
CI01000086_02203506_02218668 PTDSS1B, PTDSS1, PTDSS1A coding upstream 6858 2203023 ~ 2218685 (+)
CI01000086_02152113_02180258 PLEKHG4B coding upstream 45285 2152113 ~ 2180258 (+)
CI01000086_02104570_02112682 NA coding upstream 112735 2104570 ~ 2112808 (+)
CI01000086_02067516_02068077 NA coding upstream 155358 2066163 ~ 2070185 (+)
CI01000086_02045752_02053397 TRIP13 coding upstream 171833 2045752 ~ 2053710 (+)
CI01000086_02266795_02305843 KIF13A coding downstream 39170 2266795 ~ 2305989 (+)
CI01000086_02310487_02314131 RBM24B, RBM24 coding downstream 81723 2309348 ~ 2314147 (+)
CI01000086_02335074_02346679 SACM1L.L, SACM1LB, SACM1L, SACM1LA coding downstream 107449 2335074 ~ 2346920 (+)
CI01000086_02381193_02384764 NA coding downstream 153568 2381193 ~ 2385128 (+)
CI01000086_02387094_02397102 NOD1 coding downstream 159469 2387094 ~ 2397145 (+)
G298656 NA non-coding upstream 111374 2113883 ~ 2114169 (+)
G298601 NA non-coding upstream 161242 2062216 ~ 2064301 (+)
G298642 NA non-coding upstream 206226 2018553 ~ 2019317 (+)
G298602 NA non-coding upstream 241897 1965053 ~ 1983646 (+)
G298574 NA non-coding upstream 286233 1937608 ~ 1939310 (+)
G298611 NA non-coding downstream 25491 2253116 ~ 2321680 (+)
G298577 NA non-coding downstream 95271 2322896 ~ 2325725 (+)
G298596 NA non-coding downstream 102954 2330579 ~ 2331759 (+)
G298676 NA non-coding downstream 187757 2415382 ~ 2417816 (+)
G298694 NA non-coding downstream 229698 2457323 ~ 2457531 (+)
G298529 NA other upstream 344090 1876890 ~ 1881453 (+)
G298381 NA other upstream 1048627 1172156 ~ 1176916 (+)
CI01000086_01150842_01165271 DHDDS other upstream 1059621 1150842 ~ 1165922 (+)
G298366 NA other upstream 1077676 1136660 ~ 1147867 (+)
G298208 NA other upstream 1245433 947191 ~ 980110 (+)
CI01000086_02807666_02845401 PHLDB3, ETHE1 other downstream 579958 2806368 ~ 2845762 (+)

Expression


Co-expression Network