CI01000086_02790491_02793665


Basic Information

Item Value
gene id CI01000086_02790491_02793665
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000086
NCBI id null
chromosome length 2920448
location 2790491 ~ 2794239 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000086_02790491_02793665.mRNA
TAAAGTTCGTGTGCTTCCCAACCAAAGTGCGAGACCCTGCTGGCGGCTCACAGAACTGCACCATCACACCAACACCCTTCTTTTCGGTGAAATATCCAGCCAACTCCACCATCAGCATTCCCTCAAATTGCTCCACCACAATGATTGCTGCATCTCGTGGGATGCGTATTGTCGGGGGTACGGAGGCTGCAAAGGACCAGTGGGGGTGGCAGACCAGTTTACACTGGCGGGGCAAACACGTGTGTGGAGGAGCCATCATTACCCCTCACTGGGTCGTCACTGCCGCACATTGCTTTGTACAATATGACATGATGCTGGAGTCTGATTGGATCGTGGTGGTTGATACTATCAGTGTCTCAGATTCGTCTCAGGGCAAACGCTACAACACACTGCAAATACACCCGCACCCACAATTCTCAGAGAGCAACAACGACTACGACCTGTGTCTGCTGCGCACGCAGACTGAGATGGAGATGGGAGATGGAGTGAGACCCGTGTGTTTACCGCGTCTGAGTGAGTCTTTTCCTCCTGATTCGCCCTGCTGGGTAACAGGTTGGGGTTACACTCATGAAGGAGGGTCGGTGTCTTCACACTTGAGACAGGCTTTAGTTCAGGTGATCGATCAGTCCATATGCTTACGGCCCAACGTGTACGGCTCCCAACTCACTCCCAGAATGCTTTGTGCTGGCGTTATGGAGGGAGGAGTGGACTCCTGTCAGTCCTATAATAGTGAGAAAGAGATTCACTAAAAGTCAAATCAGATTCATATTGACCTGCAATAGTTGAGCTCATGAAGGAAAATGACATGAAACCTCATGAGAGTGGGTAAATAATGACAGAATTGTAATTTTTCTGTGAAATATTTTGATACACTGACTGAACAGTGAACACTTTACCATAAAGTCCCATTCGTTAACATTAGTAATGCATTACCATTAACTAACAATGAGCAATACACAGTATTTTCTTAATCATTGTCAGGGTTATTATTATTGTTAACTAAAACTATATTAAAAAAACATTGCAATTGCTTGAAATAAATTAAACATTAACTGAAATAAAACTTAAACTTATTTTATTTTTGCTAGATGCCAAGGCAACATTTCTCATATTAGTTTTAAGTTGAAGCACTAAAATAACTAAAACTAAATAAATTAGAACATAATAAAAACAATATAGACGTATTTAAAAAAAAACAAAAAAAACTAAAACTTTAACTAAAATTCAAATGAAAGCAGAAAATATAAAAATCTATAAAATCTAATTCAGTTAACAAAAACTGATCAATGATAGTAAAACAACACTGATTTTTGTTAACAGTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000086_02790491_02793665.mRNA True 1323 mRNA 0.40 6 2790491 2794239

Neighbor

gene id symbol gene type direction distance location
CI01000086_02773589_02785090 DRD2L coding upstream 5369 2773589 ~ 2785122 (+)
CI01000086_02741241_02763692 XRCC1 coding upstream 26133 2740656 ~ 2764358 (+)
CI01000086_02387094_02397102 NOD1 coding upstream 393346 2387094 ~ 2397145 (+)
CI01000086_02381193_02384764 NA coding upstream 405363 2381193 ~ 2385128 (+)
CI01000086_02335074_02346679 SACM1L.L, SACM1LB, SACM1L, SACM1LA coding upstream 443571 2335074 ~ 2346920 (+)
CI01000086_02807666_02845401 PHLDB3, ETHE1 coding downstream 12129 2806368 ~ 2845762 (+)
CI01000086_02848037_02858638 NA coding downstream 52793 2847032 ~ 2858832 (+)
CI01000086_02866143_02871826 PABPC1B, PABPC1, PABPC1A coding downstream 71397 2865636 ~ 2871997 (+)
CI01000086_02881148_02882305 NA coding downstream 86782 2881021 ~ 2882703 (+)
G298777 NA non-coding upstream 66938 2703650 ~ 2723553 (+)
G298792 NA non-coding upstream 87579 2702637 ~ 2702912 (+)
G298744 NA non-coding upstream 96984 2612993 ~ 2693507 (+)
G298743 NA non-coding upstream 179604 2610566 ~ 2610887 (+)
G298706 NA non-coding upstream 240523 2546716 ~ 2549968 (+)
G298850 NA non-coding downstream 107809 2902048 ~ 2902710 (+)
G298529 NA other upstream 909038 1876890 ~ 1881453 (+)
G298381 NA other upstream 1613575 1172156 ~ 1176916 (+)
CI01000086_01150842_01165271 DHDDS other upstream 1624569 1150842 ~ 1165922 (+)
G298366 NA other upstream 1642624 1136660 ~ 1147867 (+)
G298208 NA other upstream 1810381 947191 ~ 980110 (+)

Expression


Co-expression Network