CI01000086_02807666_02845401 (PHLDB3, ETHE1)


Basic Information

Item Value
gene id CI01000086_02807666_02845401
gene name PHLDB3, ETHE1
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000086
NCBI id null
chromosome length 2920448
location 2806368 ~ 2845762 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000086_02807666_02845401.mRNA
CTTTATAAACCACTGTTAATGTATATGTATGTGGTTCATTCACTCAGTGTTTATGTGAATAACATTAATTGTAGTCTACTATAATTGTAAATGTTTTGTCAAATGTTGCTTTGATGCCTTTCAGAGTGTGAGCTGCTTCCGGTGTATTTTTAACCCATAGTTAGTAGAAGATATATGGTGAATTCTGGTTGATATGGACACTTTTTCCAAGTCATCTCAATGGCAAAACGTGTCCCAATCACCCTGAATTCACTCCTAATTTAATTGATTGAAACATGTTACAATTTTCCTACTATTGAACGCCAGCAAACTCAAAACATTACCTTAACGTTAGCACATGGTTCCTGATTGGATATTTTTGGGAATCAGTTCATAAGATTCTAGGAACATCCTTTTAAAGGGATAGTCCACCCAAAAATATAAATTCTGTCATTATTTACACAAAAGATATTGAAGAATGTTGGTAACTAAACAGTTTTGGTAACACTCACAATATTTGACAAAAAAAAGTTGCTAAAACAATAAATCTGCAATAGATATTGATAGTTAATGTGATTCTCTACACAAAAGAAGATATTTTAAAGAATGTTGGTAACAAAACTGTTTCAGTTCCCATTGACTTCCATTTGTATGGACTAAATATACAATGTAAGTCAATGGGAACTGAAACTGTCTGGTTATCTTATCAACATTCTTCATAATATCTTCTTTTGTGCTCCACATAAGAAAGAAATGAATTCAGGTTTGGAAAGACATGAGGGTGAGTAAATGAAAACAGAATTTCCTTTTTTTGGGGGGGGTGAACTAGGTTCTATTTCCTATCAGTGTTGTCAGAAAGTTGCAGGGAGGTTTTTGTGACAATTTAAAAAGAAGGTTCTTCAATGGTTATTTTTACGTTTTGTTTTTAAAACCAAAAATTAAGCCTTCTCAGCAGGAATCTTGAGTTCACTCTGCATCCCACCGCCAAGTGGCAGCGCCGCGCACACGAGCTTGCTGCGCATGCGCGGACACGTCAAAGTTCCTTGTCAGTGGTCACTTTAGAATATCATAAACATTGCGTGTAGACACTACTATCTATTTTGCATATTAACATATCTATAAGCGATTCCATGCATGAGCAAATCACATCTCAGGGGAAATAATACGTATTTAGCGCGTCCCCACTATCCCGGAAGGAGGCGTGCACTCGCTAGTTACAGTTTTACATGACGACCTTAAGTTCCTTCAGTGATCTGATCTGATCTGACACTCGCCATACCGGTTTAAGGTGGGGACTCCGACGTGCACACAGAAGTAAAATGAGTGCAGCTCTTTTAAACAGACTGAAGCCTGCAGTGAGCTCTGCGATCCGGCTGTGGAGCTGCAGGGCACCGGTGATCGATAACAGAAGCGCCGCACTCAGTCACCCCCGCCCGCCGTCAGTGAGATTCTACAGCGGACTGATGGAGTCCGGAGCGCCGCTCTTCAGACAGTTGTTTGAATCTGAGAGCAGCACGTACACATACCTGCTGGCCGACACAGACACCAAAGAGGCCGTGCTGATCGACCCCGTGCTGGAAACAGTGGACAGAGACCTGCAGCTCATCAATGAACTGGGACTTAAACTCATAATGGCCGTGAACACTCACTGTCACGCGGATCACATCACTGGCACTGGACTGCTGAAGAAGAAGGTGTTTGGACTGAAGAGTTGCATCTCCAAACACAGCGGAGCCGCTGCGGACATACAGCTCTCCGAGGGAGATCAGATCACTTTCGGAAAACATTGTCTAATGGTGCGAGAGACCCCGGGACACACGGATGGATGTGTGACGTACGTCACTGGAGATCAGAGTATGGCTTTCACTGGTGACGCCCTCCTCATCCGGGGCTGCGGACGGACAGACTTTCAGCAAGGTTGTCCTAAGAGGTTGTACGAGTCCATCCACAAGAAGATTTTCACCCTGCCTGGACATTGTTTCATCTACCCCGCACATGACTACAAGGGTCAGACTGTGTCCACCGTGGATGAGGAAAAGAAGTTTAATCCACGGCTGACAAAGACGCTGGACGAGTTTGTGAACATCATGAACAACCTCAATCTCCCCAAACCTAAAAAAATAGACGGAGACTCAGCAAAGCACCTAGCGTCACCCTCGCTGCTGCAGCAGCGCATCACGGAGCTCGACCAGCAGAGGGAGGAGCTGAAAATAGAGGTGAGCAGAGAACAGCTGCAGCTGGAGGTCGCCCTGCTGCGAGGGGAACTGCAGGCAGAGCAGGAGCGACTGCGCAGACACACAGATCAGCTGCAGGTGTTGCAAGAGAAGGACATGCAAAGAAAGAGCCAGCGCTTGGCCAACAGACAGAAGGAGCGTGTTAAGCTGGAGGAGCAGCGTCTGAAGGTGGAGAAGATGAAGAGGAAGTGTGAGGAGATGGAGAAACAGATTTCCTCACAGCCAGAAGACCAGCGGGAGCAGATGCTGCTTCAGCTGCAACAGGACAAGGATGCGCTGGAAGCCACAGTGCGAACTTTTGAAGACATGGAGTTTCACATTCTCGAACTGGAAAGCGGAGTAGAAGATGAGCGAGAAGGAGAGAATGGAGAGAGCGAAACGGTCATAGAACGAGAGATAACCAGAGTACAGCACACACGTAACACATCTCAGGAACGAGTCCAGCAACTAGAAAACCAACTAAAGGAAATGGAACAAGAAAAGGATAAATCTTTGAATTCCCTCAGGCAAGAGAGAAAAGAGCTGCTCCACAAGTCTCAGAGGATTTTGAAAGAGAAGAAGCCACTCACTGATTGGTCCAACGTCACTGGATCCACCCCCTGCATGATGTCACTCAGTCCTCTGACCATTCACAAAGCAGCACAGGAATCATTGAAGGAGGCGTCCAGTTTACCCCGCAGACGGAGCTCGCATAGGAAAGTCTCAGATAGACCTCTCTCTGCGCAAGTGTTAGTGCGAATGACTCCAGACAGACAAACCTCGGAGGCTCTGTCGCCTCGCCTTCCTCATCCCACCCACAGACTGAGTAATGGACATTGTAATGGGCTGAGATCAGCGCAGAGCGATGGGAACGGCTCTTACGCGCCATGCAACAGTGCCAACACCTCCCGCGCGCCCAGCCCTCAGAGCCTCTTGGATTTGGTTGAGATCGAACGGAAACTCCGAGAGGCCAAAGCAGAGCGGGAACGTCTGCTGAAAGAGAGAGAGGAGCGTCAGCGGCTGTTGGCAGAGCAACACAGACAGAAGGAGCTGCAATCTTTAAAAATACAGACGGATGAATCAAAACTAGAGCCACATGCTGAGGAGCAGCTGCAAACAAACTCACCGCACAGGACGCTGGAGCAGGGTGTCCCGCTTTCTCTGACGGCGAATTTTGACCTGCGCGCTCACGTGGAGTCTCTGGGTCACAACGTGACGGGGTGCATGGGAGTTAATTTGTCTCCCCGGCGGTGTGGCGGTTTTCTAACCAAGCGTGGAGGTCGAGTGAAGACGTGGAGGAGGAGGTGGTTTATCTTTGATCTGGACCACCAAAGACTGGCATACTACACCGAACTAGATGAGAAGAAACTCAAAGGGGTCATTTACTTTCAGGCCATCGAGGAGGTTTATTATGATCATCTACGAACAGCTACAACATCTCCGCGGCCCAGTCTCACCTTCTGTGTGAAAACATACGAGCGGCTCTTTTTCCTCGTAGCCCACAGCGCTGAAGCCATGAGAATCTGGATGGACGTTATTGTGACTGCGACAGATGAGCACAGCAGATACTGATGAACACTAGAAATGATGCTGAACACATCCTGACACATGATGAGACCTGTAGATGAGATCGCTCAGGGACTTTAATGGATGCCACAACACAAGATGAAAGCGAAAGTCAGCGGAGTGGACCGTAGGAGCAAAGGACACTGCGATAAGGTGTATAAACACTCATAAACAGATGGTCAGTGCCGATACTGACCTTCAGTAGGTTTGTGTTCTGCTGCCATCTGCTGTTACACTAATAGAGCACATCACACACCTCATGGAGGGTGACTTTGTTTTATGTTTCTTGCACATTATTTATTATTGTTATATATTCATTTTTGTCATGTCTTTTGAAATTTTGGGGTAAAAATCCTGCAAAGTGTTA
>TU339241
TAAGTTCCTTCAGTGATCTGATCTGATCTGACACTCGCCATACCGGTTTAAGGTGGGGACTCCGACGTGCACACAGAAGTAAAATGAGTGCAGCTCTTTTAAACAGACTGAAGCCTGCAGTGAGCTCTGCGATCCGGCTGTGGAGCTGCAGGGCACCGGTGATCGATAACAGAAGCGCCGCACTCAGTCACCCCCGCCCGCCGTCAGTGAGATTCTACAGCGGACTGATGGAGTCCGGAGCGCCGCTCTTCAGACAGTTGTTTGAATCTGAGAGCAGCACGTACACATACCTGCTGGCCGACACAGACACCAAAGAGGCCGTGCTGATCGACCCCGTGCTGGAAACAGTGGACAGAGACCTGCAGCTCATCAATGAACTGGGACTTAAACTCATAATGGCCGTGAACACTCACTGTCACGCGGATCACATCACTGGCACTGGACTGCTGAAGAAGAAGGTGTTTGGACTGAAGAGTTGCATCTCCAAACACAGCGGAGCCGCTGCGGACATACAGCTCTCCGAGGGAGATCAGATCACTTTCGGAAAACATTGTCTAATGGTGCGAGAGACCCCGGGACACACGGATGGATGTGTGACGTACGTCACTGGAGATCAGAGTATGGCTTTCACTGGTGACGCCCTCCTCATCCGGGGCTGCGGACGGACAGACTTTCAGCAAGGTTGTCCTAAGAGGTTGTACGAGTCCATCCACAAGAAGATTTTCACCCTGCCTGGACATTGTTTCATCTACCCCGCACATGACTACAAGGGTCAGACTGTGTCCACCGTGGATGAGGAAAAGAAGTTTAATCCACGGCTGACAAAGACGCTGGACGAGTTTGTGAACATCATGAACAACCTCAATCTCCCCAAACCTAAAAAAATAGGTAGAGTATCTGTTTATTTATACTGCATGTACAGTTACAATACACTGTTA

Function

symbol description
phldb3 Orthologous to human PHLDB3 (pleckstrin homology like domain family B member 3).
ethe1 Predicted to enable sulfur dioxygenase activity. Predicted to be involved in glutathione metabolic process and hydrogen sulfide metabolic process. Predicted to be active in mitochondrion. Human ortholog(s) of this gene implicated in ethylmalonic encephalopathy. Orthologous to human ETHE1 (ETHE1 persulfide dioxygenase).

GO: NA

KEGG:

id description
K17725 ETHE1; sulfur dioxygenase

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000086_02807666_02845401.mRNA False 4125 mRNA 0.47 19 2806368 2845762
TU339241 True 938 TUCP 0.51 6 2807583 2811239

Neighbor

gene id symbol gene type direction distance location
CI01000086_02790491_02793665 NA coding upstream 12129 2790491 ~ 2794239 (+)
CI01000086_02773589_02785090 DRD2L coding upstream 21246 2773589 ~ 2785122 (+)
CI01000086_02741241_02763692 XRCC1 coding upstream 42010 2740656 ~ 2764358 (+)
CI01000086_02387094_02397102 NOD1 coding upstream 409223 2387094 ~ 2397145 (+)
CI01000086_02381193_02384764 NA coding upstream 421240 2381193 ~ 2385128 (+)
CI01000086_02848037_02858638 NA coding downstream 1270 2847032 ~ 2858832 (+)
CI01000086_02866143_02871826 PABPC1B, PABPC1, PABPC1A coding downstream 19874 2865636 ~ 2871997 (+)
CI01000086_02881148_02882305 NA coding downstream 35259 2881021 ~ 2882703 (+)
G298777 NA non-coding upstream 82815 2703650 ~ 2723553 (+)
G298792 NA non-coding upstream 103456 2702637 ~ 2702912 (+)
G298744 NA non-coding upstream 112861 2612993 ~ 2693507 (+)
G298743 NA non-coding upstream 195481 2610566 ~ 2610887 (+)
G298706 NA non-coding upstream 256400 2546716 ~ 2549968 (+)
G298850 NA non-coding downstream 56286 2902048 ~ 2902710 (+)
G298529 NA other upstream 924915 1876890 ~ 1881453 (+)
G298381 NA other upstream 1629452 1172156 ~ 1176916 (+)
CI01000086_01150842_01165271 DHDDS other upstream 1640446 1150842 ~ 1165922 (+)
G298366 NA other upstream 1658501 1136660 ~ 1147867 (+)
G298208 NA other upstream 1826258 947191 ~ 980110 (+)

Expression


Co-expression Network