CI01000086_02848037_02858638


Basic Information

Item Value
gene id CI01000086_02848037_02858638
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000086
NCBI id null
chromosome length 2920448
location 2847032 ~ 2858832 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000086_02848037_02858638.mRNA
CTTTAAAAAGGCCTGTTTTATGTGTTCTTCTCCGCAGTTGACGAGTTCCTCTCCTCTTGTCGTCATCCCTTTTCATCTACAGCAACATACTTCCTGCGTACTACTTATAAAGCTGCTCTAATACATGTTTTCTTCTCTACTTTGAGCATAAATAAGTCATCTGTAGAGTGATATGTAGATTGGTCTCATCTTTATCTCTTTGACCTTTGACCTCTAGCCGTTTCTGCACTTGTACACAATTATAACTCTGCAACACTCTCCAGCCTAACACTCACAGTACTACAGGGTGAATACTATAAGACATCATATAAATGTTATATTCATTGTATTATAAATAAAATACCTATGTAACAGTACATCATTGCCCATATAAGGCTTTTCCAATGTGAAATAAAATAATAAAGCATTAGGCATAATATATTAGCTAAATACGTCAAATTATGAGGTAGGGTAATTGTATTCTTATGCATAATACACAACACACACACACACATATTATAAAAATGCAAAATGCATCTTTTAATAAGACTAAGGTGGGGCTTATAAAATGTTTCTACCAATTAAAATGAACCCTCTAATAAATAGTTAGAAACTTTTTCCATGATTTACTCTTTTGTGGAACACAAAAAAGTTGTTATAATCAACTCGAGACTCTTTTCCATACAACAAAATAGTGACAAATAACACGCTAAAAGTTTCATAGAGGAGTCAATAAAGCATTTGCACTATAAACACTGAATGTTATCTGCGCTGTAATATTATAATAAATATATACAATCACGCAATGTCATGATGTGCATATTAAAGCACGACGATTATGATAAACGGAATGTTTATTTATGATTGCAGAATAAAGCACGATGATGGTAAACGGAATGTTTATTTATGATCTGACTGAATCTTTTAAATCCGATTCGTTGATCGTTATGAGCGTTTGGTAGATTGAATCTCGGCTGCTTTGAGTTCTGCATCGATCATTCATTGATATTTGTGTATCTGATGAAGATGAGGGTGAGCAGCTCTCTGTATGTGGGCGATCTGGAGCCGGACGTGACTGAAGCCATGCTGTTCGAGCGCTTCAGATCGGTCGGTTCGATTCAGTCCATCCGAGTCTGTCGAGACAAACTCACGAGCCGCTCGCTCGGATACGCGTATGTGAACTTCGAGCGACCCACTGATGCCGAACGTGCCTTGGATACCATGAACTTTGACCTCATGCAGGGTAAGCCGATGCGTCTAATGTGGTGTCAGCGAAACCCTTCACTGAGGAAGAGCGGTGTGGGAAACATCTTCATTAAGAATCTGCAGAAATCCATTAACAGCGAGGGCCTGTTTGACATCTTCTCATCATTTGGAAACATCTTGTCCTGTAAAGTGGCTTGCGATGAAAACGGATCGAAAGGCTTTGGATTTGTGCACTTTGAGACGCATGAAGCTGCTGAAAAAGCCATCAAGAAATTAAACGGCATGTTGATCAACGAGCTGAAAGTGTTCGTCGGCCACTTCAAATCGCAAAAAGAGCGTGAAGCTGAAATGCAGACGAGAGCAAAAGAGTTTACAAACATTTACATCAAGAACTTTGGCACGGATGTGGATGCCAAGATGCTCACTGAGATATTCAGCAAATTCGGCCCAACCCTGAGCGTTCGGGTCATGACGGATGAGAGCGGAAACTCTAGAGGATTTGGTTTTGTCAGCTTCGAGAGTCACAGTGATGCGAAGCAGGCGGTGGACGAATTGAACAGGACGGAGCTGAACGGCAGGCAGGTGTTCGTGGGCCGTGCTCAGAAGAGACGAGAACGTCAGGTGGAGTTGAAGCGGCGCTTCGAGATGATAAAACAGGAGCGCATGATGCGCTATCAGGGAGTGAATCTGTACGTCAAGAATCTGAGCGACAGCGTGGACAGCGAACTTCTCCTCAAAGAGTTCTCGCCATACGGGAACATCACCAGCGCTAAGGTGATGACAGACGGCAGCCGCAGCCGAGGCTTCGGATTCGTTTGCTTCTCCTCTGCTGAAGAGGCCACCAGAGCCATTACTGAGATGAACTGCCGTATCATCGGCTCCAAGCCCATATACGTCTCTCTCGCCCAGAGGAAGAAGGAGCGTCAGGCCCACCTCATCCACCAATACATGATGAGAAGGGCAAGCTTCCAAAGGCAGCAGCTGATGCTAAACCCGCTGGTGGAGCCGTTCCACCCGAAACCACACGCTGAGCACTTCATACCTCCACAGGTCGAGATTCACATCATCTACAGAGTGTGGAGAAAACCACATGTGACGGGCTTAATTACATGCTTGATCTGTATATTTCACAGGTTCAGAATCACTCTTCATACCACGTCACCCAACATCAACCCAGCACTCAATGGGACGCACAGAGCATCAGCCCTCAATGCCCAAAACGCCCCAAGAGCCGTTCAGTCCACAGTGAGTGACATCAGACCCAACACATCCATGATGAGCTGTCAGAGCGAAGCTAGTCACACTCACTGGACGCCCGGCACAGCTGCACCAGTGAATGGAGCACTGCAACACACGTTCACACCTGAAGATCACAACTATCACAGGTTCACAAGCGCACCGCAGGAGCAATGGGCTGTGCAGCAGGTCCAGGAGTCTCTGACCGCATCCATGTCCAGCTCACCAGAAAACCTCAAACAGATGCTGAGCAAGTTTATTTCTGTATTATTGTGGCTTGTCGATATTTTAAAACTCTTGTTCGATTTGTTTCCATTTCTTTTGAGCGCATCTCTCCATACTTCCACAGGTCACAGCCTCTTCCCACTCGTCCAGGACATGGTAGGGCCCTTGGCGAATAAGATCACTGAAATGCTGTTAGAGATTGATGAATCTGAACTGCTTCAATTGCTGCATTGTCATGAGGCTTTGTGCATGAAGGTGAATGAAGCGCTTGCTGTTTATCAGTCTTATCAGCCAGTGGAAGCGACACAGATATAATTCACCAACCCTGTCTGAGACAGTGTCCAAGACCACAGCTTATTTTTTCATTTTAAAAATGAATATACATTTGATTTTTTTTTTTATTTCTTTTAATTCATTTAACAATTTAATGTTAATTACAAAAATTGTTCTGCATAAATATATTTGCATTTTTCAATATCAATTAAGAAAATTGTAAATCCACAATATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000086_02848037_02858638.mRNA True 3155 mRNA 0.43 12 2847032 2858832

Neighbor

gene id symbol gene type direction distance location
CI01000086_02807666_02845401 PHLDB3, ETHE1 coding upstream 1270 2806368 ~ 2845762 (+)
CI01000086_02790491_02793665 NA coding upstream 52793 2790491 ~ 2794239 (+)
CI01000086_02773589_02785090 DRD2L coding upstream 61910 2773589 ~ 2785122 (+)
CI01000086_02741241_02763692 XRCC1 coding upstream 82674 2740656 ~ 2764358 (+)
CI01000086_02387094_02397102 NOD1 coding upstream 449887 2387094 ~ 2397145 (+)
CI01000086_02866143_02871826 PABPC1B, PABPC1, PABPC1A coding downstream 6804 2865636 ~ 2871997 (+)
CI01000086_02881148_02882305 NA coding downstream 22189 2881021 ~ 2882703 (+)
G298777 NA non-coding upstream 123479 2703650 ~ 2723553 (+)
G298792 NA non-coding upstream 144120 2702637 ~ 2702912 (+)
G298744 NA non-coding upstream 153525 2612993 ~ 2693507 (+)
G298743 NA non-coding upstream 236145 2610566 ~ 2610887 (+)
G298706 NA non-coding upstream 297064 2546716 ~ 2549968 (+)
G298850 NA non-coding downstream 43216 2902048 ~ 2902710 (+)
G298529 NA other upstream 965579 1876890 ~ 1881453 (+)
G298381 NA other upstream 1670116 1172156 ~ 1176916 (+)
CI01000086_01150842_01165271 DHDDS other upstream 1681110 1150842 ~ 1165922 (+)
G298366 NA other upstream 1699165 1136660 ~ 1147867 (+)

Expression


Co-expression Network