CI01000086_02881148_02882305


Basic Information

Item Value
gene id CI01000086_02881148_02882305
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000086
NCBI id null
chromosome length 2920448
location 2881021 ~ 2882703 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000086_02881148_02882305.mRNA
TTATAAATAGGAGTCGTGTCAGTGACAGATGTGAGTCTCTCACAGCTTCAGTCTAGATGAGGTTTAAGTGTTAGACACTGTGCCTTTGAGTTATAGAAGATACCACACATCTCCGCCATCTGACAACATGGATTGCGTATGTGATTGTTCAGACTACAGTAACGGACAGGCGAACGCCATCCTCTTTAACATTCTCAGCCGAGGCGAGTCAACTCAGAACGAGATGAACTACAAGCGGGTTCCTCAGACGTGCCACTGCGAGAAACGCAGGAAAGTATGTCTGAAAACACCCAACGAGACGTGTCAGGTTGCTTCGGATGTGCTGGTCAAGACCATGCACTTCATGAAGAGTTTGCCAGCGTTCCAGCAACTACCGCCCAAAGACCAGCTGTCTTTGTTGCAGAACTCCTGGGCACCACTTTTCATTCTGGGTCTGGCCCAGGACAGAATTTGTTTCGAGGTTGATGACATTCCGGCACCCAGCATGCTGAAAAGAATTCTTCTCAACAACCAGGAGGCAATGAACTCCGATCGAGAGCAGCCCACGATGGCCGGTGTGCAAACCCTTAAAGCGTGCCTCAAGAAGTTCTGGAGTCTCGATTTAAGCCCCAAGGAGTACGCTTATCTGAAAGGCACCGTAATATTCAATCCAGATGTACCAGGCCTGAAGGCATCTCTGTTCATTGAGGGTTTGCAATATGAAGCTCAGCATGCCCTGAAGGAGGTCCTGGTACCTCTTCATCCAGAGGATAGAGGGCGATTTGCTCGTATCCTCCTCACTGCATCCACTTTAAAGACCATCACTCCGAGCCTCATCACAGAGCTCTTCTTTCGGCCGGTCATTGGTCAGGCAGATCTTCTGGACTTGTTGATTGACATGCTTTTCTCAAGGTAGTGAACCAAGGACTCACAGACCGCTTGAATTCGGACTTTCAAAAGAACATTCTTTTCTCCTGGGTTTGGTGGGAAATCTGAGGTGCAAGCATTGGATGAAAATCACACTACGTTACGTCTGAAATATTTGAAAAGTTACAGACTTTATTGTTTACACAGTTAAATGAAATTACTGCACCTTTGTAATGGTATTTAGGTCACAACTATGTGATTTATGTCTTAGTACTGATTGTTTTTTGCCTTTTGATAAAAGCACCATTGTAGTTTTTGAATGGGATGGATTTTAAACCTACAAAGTATAAACCATCTCCGCGCCTAAGGGAGGTTCATGTATTGTCTCTGTGAGAAAGCTAGATTGAATCTGAGGAAAACATTTTTATATTCTTAAATATACTGCAA

Function

NR:

description
Nr0b2a protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000086_02881148_02882305.mRNA True 1293 mRNA 0.45 2 2881021 2882703

Neighbor

gene id symbol gene type direction distance location
CI01000086_02866143_02871826 PABPC1B, PABPC1, PABPC1A coding upstream 9024 2865636 ~ 2871997 (+)
CI01000086_02848037_02858638 NA coding upstream 22189 2847032 ~ 2858832 (+)
CI01000086_02807666_02845401 PHLDB3, ETHE1 coding upstream 35259 2806368 ~ 2845762 (+)
CI01000086_02790491_02793665 NA coding upstream 86782 2790491 ~ 2794239 (+)
CI01000086_02773589_02785090 DRD2L coding upstream 95899 2773589 ~ 2785122 (+)
G298777 NA non-coding upstream 157468 2703650 ~ 2723553 (+)
G298792 NA non-coding upstream 178109 2702637 ~ 2702912 (+)
G298744 NA non-coding upstream 187514 2612993 ~ 2693507 (+)
G298743 NA non-coding upstream 270134 2610566 ~ 2610887 (+)
G298706 NA non-coding upstream 331053 2546716 ~ 2549968 (+)
G298850 NA non-coding downstream 19345 2902048 ~ 2902710 (+)
G298529 NA other upstream 999568 1876890 ~ 1881453 (+)
G298381 NA other upstream 1704105 1172156 ~ 1176916 (+)
CI01000086_01150842_01165271 DHDDS other upstream 1715099 1150842 ~ 1165922 (+)
G298366 NA other upstream 1733154 1136660 ~ 1147867 (+)

Expression


Co-expression Network