CI01000086_02893723_02895660


Basic Information

Item Value
gene id CI01000086_02893723_02895660
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000086
NCBI id null
chromosome length 2920448
location 2893421 ~ 2895833 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000086_02893723_02895660.mRNA
AAGATCAGGAGGTGTTTCTAGGTAAAACTGTTAGTAATGAGCTCCTAGAGTGAGGAGGACAGTGTCATACTACACGCGTGCTGCCTACTACAGCATGTGCACTGACACTGAAGAGCGCAGCCCGTGAAGACGGTGATCAGATGCTCCGGACTGTGAGTGTGAGAGTTTGGATGATGCCGCCGGCTGTGCCGCTGACGCTTGTCTGCGCGATGCTGTGCGTCTCCACATGCGTCGCGTTGTGTCCGCCGCGCTGCGAGTGCTCTGAAAGTCAACATACGGTGCGCTGCGCGTCTGCCGGGCTTTTCCGTATCCCAGCCGCGATCCCGAGCGACACGAGCAGCCTAATCATCACCGGAAACACGATTCCCAGACTCGATCACAGCGCGTTCAACGGACTGCAAAACGTCACCCACCTAAACCTAAGCAATAATGGCATTATGGAGGTTGGATCGCATGCATTCTCTTCTCTGCACATGCTGCGTTCTCTAATCCTGAACGACAACCAGCTGGTGCTCATCCATCCAGAGGCGTTCTCCGTGCCTGGAAGCCCCCTGCAGGAGCTCATCCTCCGCTCGTCTCTCTACAACTACACATCTCTGACTGACCTCATCACCGCCCTGCGCTGGGGCGAGCTCACAAATCTGCTGCGCCTCGACCTGTCGGGCAACCGCCTTGTCCTCTTACCCCCGGGGATGTTCGCTCCTCTGCCGAACCTGCAGCATCTCCATCTAAACAACAACTCTCTGGTGGCCGTCTACAACAGCACTTTCTCTGGTATTGATCAACTTTTGGAGCTGGACTTGACCAGAAATGCATTTAGAACTATCAACGATGAGGGTCTTCACGAGTTGGAGCGACTCGGTCGGGTCCATCTGCTGTTGGGTCAGAATCCTTACGTGTGCACGTGTGAAGCGCAAGAGTTTGCGAACTGGCTAAATAGTTCAAAGGTCAGGGTGGGCGATGCGGACAAGCTGTATTGCGAGTTCCCCGCAGCGCTGCGTGACGTGTCTTTGCGGGTTCTCAGTGCACAGGCATTGGGGTGTTACGGTAAGCCGTACGAAGAGATTATCGACTTGTCCCTACATACTTCCTACGTGTTCCTTGGATTAGTGCTGGGATTCGTTGGCATGGTCTTTCTACTTGTCGTCTACCTCAACAGAAAGGGTATCAAGAAATGGATCACAGACATACATGAAGCATGCCGAGATGTGCTGGAGGGGTATCATTACCGTTATGAAATTGACTCTGACCCACGACTGGGGCGTGTTCCAAACATTAACCAGGGTCGGCCTCGAAATGACCCGCATTTGGGGCACATCCCTTCTGACGCCCGTATCACACAGATGCCGTCGGATGTGACTCTATAACTGGACTGCAAATTGCTGCACAATGAACCCATTTTTTATAGAAATGTTTATAGGTATTATGTCCTGATATTTCAGTCTGTAGCAAAGTGGAAAAATCAAGGAAAATCATTTGTCATTGAGACTAGTGGTCAGCAGATATTATTAACTAGAGAGATGGCTGGCTGATGGCTTATGTAATGCCAATTTATGCATGATGTAGGCTAATACAATATATATTTATTATATACAATATATATTTGACCAGTGCAATATGAGTCAGCGCAATTTTTGGTCTGTTTTCCACAAGGAGAAATTGTAAAAAA

Function

NR:

description
Trophoblast glycoprotein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000086_02893723_02895660.mRNA True 1669 mRNA 0.50 2 2893421 2895833

Neighbor

gene id symbol gene type direction distance location
CI01000086_02886112_02888612 KDF1A coding downstream 3208 2885447 ~ 2890213 (-)
CI01000086_02610598_02642920 CDK14 coding downstream 250501 2610567 ~ 2642920 (-)
CI01000086_02543856_02545475 FZD1, FZD1.L coding downstream 347613 2542368 ~ 2545808 (-)
CI01000086_02403053_02403317 ZNRF2 coding downstream 490104 2402872 ~ 2403317 (-)
CI01000086_02400288_02400580 NA coding downstream 492813 2399858 ~ 2400608 (-)
CI01000086_02897831_02901375 TMEM222, TMEM222A, TMEM222B coding upstream 1971 2897804 ~ 2901375 (-)
CI01000086_02906694_02918246 WDTC1 coding upstream 10380 2906213 ~ 2918246 (-)
G299861 NA non-coding downstream 16377 2876747 ~ 2877044 (-)
G299825 NA non-coding downstream 167587 2725595 ~ 2725834 (-)
G299803 NA non-coding downstream 198442 2651013 ~ 2694979 (-)
G299805 NA non-coding downstream 239011 2653669 ~ 2654410 (-)
G299609 NA non-coding downstream 287025 2547583 ~ 2606396 (-)
G299598 NA other downstream 25318 2865682 ~ 2868103 (-)
CI01000086_02366362_02373059 SLC6A20 other downstream 438856 2364331 ~ 2373059 (-)
CI01000086_01852638_01897719 UBR5 other downstream 990002 1852146 ~ 1897719 (-)
G299528 NA other downstream 1198244 1668206 ~ 1695177 (-)
CI01000086_01257926_01260025 SERPINB1L4, SERPINB14 other downstream 1632184 1257926 ~ 1260025 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_011125 tpbgl coding NC_007127.7 CM002900.2 54925437 ~ 54928813 (-)