CI01000086_02897831_02901375 (TMEM222, TMEM222A, TMEM222B)


Basic Information

Item Value
gene id CI01000086_02897831_02901375
gene name TMEM222, TMEM222A, TMEM222B
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000086
NCBI id null
chromosome length 2920448
location 2897804 ~ 2901375 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000086_02897831_02901375.mRNA
CTGGTTTCTGCCATTCATTGGGCACATGGGCATATGTACATCCACCGGTGTGATCAGGGATTTTGCTGGCCCTTACTTCGTTTCAGAGGACAACATGGCGTTTGGAAAACCAACAAAGTACTGGAAGCTGGATAAGAATAAAGTGTACGGCGGTGGAGCAAACGCCTGGGATGTGGCCGTGCACGAGGCATCTGAGGAATACAAAACTAGAATGCACAATCTGTGTTGTGATAACTGCCACTCTCATGTTGCCATGGCTCTGAACCTCATGCGCTACGACAACTGCTCCTCGTGGAACATGGTCAATCTCTGCTTACTGTCCTTCATCCACAGCAAACATGTCAGCTTTGTGGGGTTCCTGAAGACCTGGCTGCCTTTCCTGATGATTTGTGGGGTTATAGTCACCATCGCCCTTGCTGTCAACCTGCGATGACGGAGGTTGGATGACAGGAGCATCAAA

Function

symbol description
tmem222b Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human TMEM222 (transmembrane protein 222).
tmem222a Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human TMEM222 (transmembrane protein 222).
tmem222 Predicted to be integral component of membrane.

GO:

id name namespace
GO:0008150 biological_process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000086_02897831_02901375.mRNA True 460 mRNA 0.50 5 2897804 2901375

Neighbor

gene id symbol gene type direction distance location
CI01000086_02893723_02895660 NA coding downstream 1971 2893421 ~ 2895833 (-)
CI01000086_02886112_02888612 KDF1A coding downstream 7591 2885447 ~ 2890213 (-)
CI01000086_02610598_02642920 CDK14 coding downstream 254884 2610567 ~ 2642920 (-)
CI01000086_02543856_02545475 FZD1, FZD1.L coding downstream 351996 2542368 ~ 2545808 (-)
CI01000086_02403053_02403317 ZNRF2 coding downstream 494487 2402872 ~ 2403317 (-)
CI01000086_02906694_02918246 WDTC1 coding upstream 4838 2906213 ~ 2918246 (-)
G299861 NA non-coding downstream 20760 2876747 ~ 2877044 (-)
G299825 NA non-coding downstream 171970 2725595 ~ 2725834 (-)
G299803 NA non-coding downstream 202825 2651013 ~ 2694979 (-)
G299805 NA non-coding downstream 243394 2653669 ~ 2654410 (-)
G299609 NA non-coding downstream 291408 2547583 ~ 2606396 (-)
G299598 NA other downstream 29701 2865682 ~ 2868103 (-)
CI01000086_02366362_02373059 SLC6A20 other downstream 443239 2364331 ~ 2373059 (-)
CI01000086_01852638_01897719 UBR5 other downstream 994385 1852146 ~ 1897719 (-)
G299528 NA other downstream 1202627 1668206 ~ 1695177 (-)
CI01000086_01257926_01260025 SERPINB1L4, SERPINB14 other downstream 1636567 1257926 ~ 1260025 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_011126 tmem222a coding NC_007127.7 CM002900.2 54930747 ~ 54942534 (-)