G298071


Basic Information

Item Value
gene id G298071
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000086
NCBI id null
chromosome length 2920448
location 356731 ~ 357046 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU338403
CTTAATGTTATGAAGCGACGAGAATAATTTTTGTGCGCAAAAACAAAACAAAAATTATGATTTTTTTTTCAACAAATTCATCTCTCCCCTGTCATTCTGCTACGCTATTTTCATTGCAGCGCTTCCAGGTTCTACATCTGAACGCCGGCTCATTATTGGCCGAAGCTGTTCACGTGACCAGCACGACGCATGTGAGTGATGCTGATGCTGGAGCCGGCCAACATGGAAACGTGTAACAGACTGACAGGGAAGAGGAAAAATTGTTGAATAAAGTCGTTATTTTTGTTTTGTTTTTGCATGCAAAATGTATTCTTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU338403 True 316 lncRNA 0.40 1 356731 357046

Neighbor

gene id symbol gene type direction distance location
CI01000086_00347031_00351599 NA coding upstream 4021 344994 ~ 352710 (+)
CI01000086_00013752_00066354 PLCL2 coding upstream 290377 13752 ~ 66354 (+)
CI01000086_00000438_00009357 NA coding upstream 347239 438 ~ 9492 (+)
CI01000086_00368462_00375640 RAB5AA, RAB5A.L, RAB5A, RAB5AB coding downstream 9948 366994 ~ 376076 (+)
CI01000086_00499939_00501377 NA coding downstream 142215 498625 ~ 502116 (+)
CI01000086_00515623_00516606 NA coding downstream 158577 515623 ~ 516856 (+)
CI01000086_00528152_00537757 NR1D2 coding downstream 171028 528074 ~ 538752 (+)
CI01000086_00569583_00570500 NA coding downstream 212485 569531 ~ 570500 (+)
G298092 NA non-coding upstream 2232 354243 ~ 354499 (+)
G298083 NA non-coding upstream 40841 315633 ~ 315890 (+)
G298045 NA non-coding upstream 98673 257847 ~ 258058 (+)
G298044 NA non-coding upstream 98971 257560 ~ 257760 (+)
G298042 NA non-coding upstream 100616 255758 ~ 256115 (+)
G298096 NA non-coding downstream 8485 365531 ~ 365764 (+)
G298104 NA non-coding downstream 33535 390581 ~ 390856 (+)
G298105 NA non-coding downstream 34966 392012 ~ 392255 (+)
G298106 NA non-coding downstream 35942 392988 ~ 393257 (+)
G298164 NA non-coding downstream 138184 495230 ~ 905854 (+)
G298208 NA other downstream 590145 947191 ~ 980110 (+)
G298366 NA other downstream 779614 1136660 ~ 1147867 (+)
CI01000086_01150842_01165271 DHDDS other downstream 805728 1150842 ~ 1165922 (+)
G298381 NA other downstream 815110 1172156 ~ 1176916 (+)

Expression


Co-expression Network