G298104


Basic Information

Item Value
gene id G298104
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000086
NCBI id null
chromosome length 2920448
location 390581 ~ 390856 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU338437
GCTGACTTATGAGCTTTTGACAAATGTGACTCATACAGGAATGTCAGAAAAGTGAAATTGATGGCAGCGGCATTTCATAATGCGCACAGAACCTCCTGGAAACCAACGCTTGTTTAAAAACACCGTTTATATTGGCTTTTTATGGGCACTTTTGTTTTGTTTTGAAAAGAGGCAAATTGTAGATTTGGTGATTAGTGACTGCAAGTATGACTCATTTTTACCGTCTCGTGGACCAAAACAAGCAAAGTCGAGATAATTGGCGTGCACTTTTTGTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU338437 True 276 lncRNA 0.39 1 390581 390856

Neighbor

gene id symbol gene type direction distance location
CI01000086_00368462_00375640 RAB5AA, RAB5A.L, RAB5A, RAB5AB coding upstream 14505 366994 ~ 376076 (+)
CI01000086_00347031_00351599 NA coding upstream 37871 344994 ~ 352710 (+)
CI01000086_00013752_00066354 PLCL2 coding upstream 324227 13752 ~ 66354 (+)
CI01000086_00000438_00009357 NA coding upstream 381089 438 ~ 9492 (+)
CI01000086_00499939_00501377 NA coding downstream 108405 498625 ~ 502116 (+)
CI01000086_00515623_00516606 NA coding downstream 124767 515623 ~ 516856 (+)
CI01000086_00528152_00537757 NR1D2 coding downstream 137218 528074 ~ 538752 (+)
CI01000086_00569583_00570500 NA coding downstream 178675 569531 ~ 570500 (+)
CI01000086_00598327_00599803 NA coding downstream 207471 598327 ~ 599895 (+)
G298096 NA non-coding upstream 24817 365531 ~ 365764 (+)
G298071 NA non-coding upstream 33535 356731 ~ 357046 (+)
G298092 NA non-coding upstream 36082 354243 ~ 354499 (+)
G298083 NA non-coding upstream 74691 315633 ~ 315890 (+)
G298045 NA non-coding upstream 132523 257847 ~ 258058 (+)
G298105 NA non-coding downstream 1156 392012 ~ 392255 (+)
G298106 NA non-coding downstream 2132 392988 ~ 393257 (+)
G298164 NA non-coding downstream 104374 495230 ~ 905854 (+)
G298198 NA non-coding downstream 182536 573392 ~ 578643 (+)
CI01000086_00629905_00632087 NA non-coding downstream 238915 629765 ~ 632433 (+)
G298208 NA other downstream 556335 947191 ~ 980110 (+)
G298366 NA other downstream 745804 1136660 ~ 1147867 (+)
CI01000086_01150842_01165271 DHDDS other downstream 771918 1150842 ~ 1165922 (+)
G298381 NA other downstream 781300 1172156 ~ 1176916 (+)

Expression


Co-expression Network