G298105


Basic Information

Item Value
gene id G298105
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000086
NCBI id null
chromosome length 2920448
location 392012 ~ 392255 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU338438
CATTCAAAACAATACGAGTGACGTGTCTTGTGTTATTCTATAGTCTTTGATTGAAACACACCCAAGGTTGATGTTTTACGGCAAACGTGATTGGTTTTCAAGTGTCACATGATTGAAAATTCGCAAATACTACGAATTTTCTACTTTTATGATACCTTTAAGGCCATTTTACCTTGGTTTACCTGCTTCATATTTTTGTGGAAACGGTCATACATTTTTTTTCCTTCAGGATTCTTTGGTGAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU338438 True 244 lncRNA 0.34 1 392012 392255

Neighbor

gene id symbol gene type direction distance location
CI01000086_00368462_00375640 RAB5AA, RAB5A.L, RAB5A, RAB5AB coding upstream 15936 366994 ~ 376076 (+)
CI01000086_00347031_00351599 NA coding upstream 39302 344994 ~ 352710 (+)
CI01000086_00013752_00066354 PLCL2 coding upstream 325658 13752 ~ 66354 (+)
CI01000086_00000438_00009357 NA coding upstream 382520 438 ~ 9492 (+)
CI01000086_00499939_00501377 NA coding downstream 107006 498625 ~ 502116 (+)
CI01000086_00515623_00516606 NA coding downstream 123368 515623 ~ 516856 (+)
CI01000086_00528152_00537757 NR1D2 coding downstream 135819 528074 ~ 538752 (+)
CI01000086_00569583_00570500 NA coding downstream 177276 569531 ~ 570500 (+)
CI01000086_00598327_00599803 NA coding downstream 206072 598327 ~ 599895 (+)
G298104 NA non-coding upstream 1156 390581 ~ 390856 (+)
G298096 NA non-coding upstream 26248 365531 ~ 365764 (+)
G298071 NA non-coding upstream 34966 356731 ~ 357046 (+)
G298092 NA non-coding upstream 37513 354243 ~ 354499 (+)
G298083 NA non-coding upstream 76122 315633 ~ 315890 (+)
G298106 NA non-coding downstream 733 392988 ~ 393257 (+)
G298164 NA non-coding downstream 102975 495230 ~ 905854 (+)
G298198 NA non-coding downstream 181137 573392 ~ 578643 (+)
CI01000086_00629905_00632087 NA non-coding downstream 237516 629765 ~ 632433 (+)
G298220 NA non-coding downstream 260011 652266 ~ 721985 (+)
G298208 NA other downstream 554936 947191 ~ 980110 (+)
G298366 NA other downstream 744405 1136660 ~ 1147867 (+)
CI01000086_01150842_01165271 DHDDS other downstream 770519 1150842 ~ 1165922 (+)
G298381 NA other downstream 779901 1172156 ~ 1176916 (+)

Expression


Co-expression Network