Item | Value |
---|---|
gene id | G298106 |
gene name | NA |
gene type | non-coding |
species | grasscarp (Ctenopharyngodon idella) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | CI01000086 |
NCBI id | null |
chromosome length | 2920448 |
location | 392988 ~ 393257 (+) |
genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU338439 | True | 270 | lncRNA | 0.42 | 1 | 392988 | 393257 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
CI01000086_00368462_00375640 | RAB5AA, RAB5A.L, RAB5A, RAB5AB | coding | upstream | 16912 | 366994 ~ 376076 (+) |
CI01000086_00347031_00351599 | NA | coding | upstream | 40278 | 344994 ~ 352710 (+) |
CI01000086_00013752_00066354 | PLCL2 | coding | upstream | 326634 | 13752 ~ 66354 (+) |
CI01000086_00000438_00009357 | NA | coding | upstream | 383496 | 438 ~ 9492 (+) |
CI01000086_00499939_00501377 | NA | coding | downstream | 106004 | 498625 ~ 502116 (+) |
CI01000086_00515623_00516606 | NA | coding | downstream | 122366 | 515623 ~ 516856 (+) |
CI01000086_00528152_00537757 | NR1D2 | coding | downstream | 134817 | 528074 ~ 538752 (+) |
CI01000086_00569583_00570500 | NA | coding | downstream | 176274 | 569531 ~ 570500 (+) |
CI01000086_00598327_00599803 | NA | coding | downstream | 205070 | 598327 ~ 599895 (+) |
G298105 | NA | non-coding | upstream | 733 | 392012 ~ 392255 (+) |
G298104 | NA | non-coding | upstream | 2132 | 390581 ~ 390856 (+) |
G298096 | NA | non-coding | upstream | 27224 | 365531 ~ 365764 (+) |
G298071 | NA | non-coding | upstream | 35942 | 356731 ~ 357046 (+) |
G298092 | NA | non-coding | upstream | 38489 | 354243 ~ 354499 (+) |
G298164 | NA | non-coding | downstream | 101973 | 495230 ~ 905854 (+) |
G298198 | NA | non-coding | downstream | 180135 | 573392 ~ 578643 (+) |
CI01000086_00629905_00632087 | NA | non-coding | downstream | 236514 | 629765 ~ 632433 (+) |
G298220 | NA | non-coding | downstream | 259009 | 652266 ~ 721985 (+) |
G298219 | NA | non-coding | downstream | 307318 | 700575 ~ 753258 (+) |
G298208 | NA | other | downstream | 553934 | 947191 ~ 980110 (+) |
G298366 | NA | other | downstream | 743403 | 1136660 ~ 1147867 (+) |
CI01000086_01150842_01165271 | DHDDS | other | downstream | 769517 | 1150842 ~ 1165922 (+) |
G298381 | NA | other | downstream | 778899 | 1172156 ~ 1176916 (+) |