G298106



Basic Information


Item Value
gene id G298106
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000086
NCBI id null
chromosome length 2920448
location 392988 ~ 393257 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU338439
GGACCTGGTAATATCCCAAATTAAATGTCCCACTTCAGACCTCAGTGAGTTCCAGTCACTCATACGTCACGTTCACATGTTTACCACAAGACATAAAAACACCTGACGAAAAGCAAAAACGAAGGTAACATTACATGAACTTAATGTCTAATGTTAATGTTTGTTTTTACGTTCATTTTATTTGGAATCAGGACACGCCGACATCTTGGAAGTGACGTCAAATGATGCGTCTCGCTGAGGTACCCCGAGTTCACACGCCAAATGTCCGAC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU338439 True 270 lncRNA 0.42 1 392988 393257

Neighbor


gene id symbol gene type direction distance location
CI01000086_00368462_00375640 RAB5AA, RAB5A.L, RAB5A, RAB5AB coding upstream 16912 366994 ~ 376076 (+)
CI01000086_00347031_00351599 NA coding upstream 40278 344994 ~ 352710 (+)
CI01000086_00013752_00066354 PLCL2 coding upstream 326634 13752 ~ 66354 (+)
CI01000086_00000438_00009357 NA coding upstream 383496 438 ~ 9492 (+)
CI01000086_00499939_00501377 NA coding downstream 106004 498625 ~ 502116 (+)
CI01000086_00515623_00516606 NA coding downstream 122366 515623 ~ 516856 (+)
CI01000086_00528152_00537757 NR1D2 coding downstream 134817 528074 ~ 538752 (+)
CI01000086_00569583_00570500 NA coding downstream 176274 569531 ~ 570500 (+)
CI01000086_00598327_00599803 NA coding downstream 205070 598327 ~ 599895 (+)
G298105 NA non-coding upstream 733 392012 ~ 392255 (+)
G298104 NA non-coding upstream 2132 390581 ~ 390856 (+)
G298096 NA non-coding upstream 27224 365531 ~ 365764 (+)
G298071 NA non-coding upstream 35942 356731 ~ 357046 (+)
G298092 NA non-coding upstream 38489 354243 ~ 354499 (+)
G298164 NA non-coding downstream 101973 495230 ~ 905854 (+)
G298198 NA non-coding downstream 180135 573392 ~ 578643 (+)
CI01000086_00629905_00632087 NA non-coding downstream 236514 629765 ~ 632433 (+)
G298220 NA non-coding downstream 259009 652266 ~ 721985 (+)
G298219 NA non-coding downstream 307318 700575 ~ 753258 (+)
G298208 NA other downstream 553934 947191 ~ 980110 (+)
G298366 NA other downstream 743403 1136660 ~ 1147867 (+)
CI01000086_01150842_01165271 DHDDS other downstream 769517 1150842 ~ 1165922 (+)
G298381 NA other downstream 778899 1172156 ~ 1176916 (+)

Expression



Co-expression Network